Variant report

Variant	rs12124775
Chromosome Location	chr1:169816201-169816202
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:169815997..169818292-chr1:169837214..169839882,2	K562	blood:
2	chr1:169815223..169817412-chr1:169826417..169828144,2	K562	blood:

Extended variants
information (count: 293 )
Associated
traits (count: 12 )

rSNPs within LD-proxies of this variant (count:284)

rs_ID	r²[population]
rs1046058	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10489173	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10489174	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10489176	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10800489	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10919253	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12116524	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12116601	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12116650	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12117794	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12118305	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12118431	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12118559	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12118739	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12119368	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12119386	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12119447	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12119473	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12119635	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12119665	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12120114	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12120229	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12120647	0.84[EUR][1000 genomes]
rs12120727	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12121045	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12121113	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12121313	0.84[EUR][1000 genomes]
rs12121443	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12121451	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12121606	0.84[EUR][1000 genomes]
rs12121614	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12121797	0.82[EUR][1000 genomes]
rs12122419	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12122582	0.84[EUR][1000 genomes]
rs12122720	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12122767	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12122776	0.83[EUR][1000 genomes]
rs12122781	0.83[EUR][1000 genomes]
rs12122885	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12123432	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12123483	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12123686	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12123806	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12123835	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12123865	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12123942	0.84[EUR][1000 genomes]
rs12124032	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12124384	0.85[AMR][1000 genomes]
rs12124561	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12124750	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12124907	0.82[EUR][1000 genomes]
rs12125023	1.00[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs12125595	0.89[EUR][1000 genomes]
rs12125679	0.89[EUR][1000 genomes]
rs12126591	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12127120	0.82[EUR][1000 genomes]
rs12127174	0.85[AMR][1000 genomes]
rs12127211	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12127500	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12127911	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12128126	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12128308	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12128695	0.84[EUR][1000 genomes]
rs12128704	0.84[EUR][1000 genomes]
rs12128929	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12129052	0.89[EUR][1000 genomes]
rs12129164	0.85[AMR][1000 genomes]
rs12129443	0.84[EUR][1000 genomes]
rs12129951	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12130150	0.85[AMR][1000 genomes]
rs12130263	0.89[EUR][1000 genomes]
rs12130372	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12130417	0.85[AMR][1000 genomes]
rs12130472	0.85[AMR][1000 genomes]
rs12130561	0.85[AMR][1000 genomes]
rs12130784	0.84[EUR][1000 genomes]
rs12131192	0.89[EUR][1000 genomes]
rs12131357	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12131444	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12132173	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12132222	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12132384	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12132633	1.00[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs12132692	0.82[EUR][1000 genomes]
rs12132892	0.85[AMR][1000 genomes]
rs12133074	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12133108	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12133115	0.82[EUR][1000 genomes]
rs12133369	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12133849	0.86[EUR][1000 genomes]
rs12134837	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12134886	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12135057	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12135355	0.85[AMR][1000 genomes]
rs12135361	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12135436	0.85[AMR][1000 genomes]
rs12135559	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12135642	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12135726	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12136425	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12138083	0.85[AMR][1000 genomes]
rs12138861	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12139629	0.85[AMR][1000 genomes]
rs12140134	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12140656	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12140984	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12141317	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12141572	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12141680	0.85[AMR][1000 genomes]
rs12142093	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12142355	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12142511	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12143057	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12143161	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12143260	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12143301	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12143739	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12143781	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12144122	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12144204	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12144207	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12144599	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12144624	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12144683	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12145295	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12145417	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12145458	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12145504	0.84[EUR][1000 genomes]
rs12145574	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12145705	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12146043	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1321657	0.82[EUR][1000 genomes]
rs1496	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16828222	0.89[EUR][1000 genomes]
rs16862751	0.89[EUR][1000 genomes]
rs17349733	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17349740	0.82[EUR][1000 genomes]
rs17527744	0.84[EUR][1000 genomes]
rs17529304	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17529791	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17543370	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17543611	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17543730	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17544586	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17544823	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17593568	0.81[EUR][1000 genomes]
rs17593862	1.00[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs17601414	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17601582	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17601631	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17602051	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17602072	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17602610	1.00[AFR][1000 genomes]
rs17602701	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17603570	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17603666	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2057249	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2093050	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2145046	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2272919	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2272920	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2272921	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2474698	0.82[EUR][1000 genomes]
rs2474704	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2474705	0.95[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2750018	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2750019	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2806384	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2806385	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2806387	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2806389	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2806390	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2806392	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs28652825	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3766135	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3766141	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3766143	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3766152	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs41272481	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41304562	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4385776	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4519	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs476485	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs478116	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs483103	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs486431	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs490469	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs490776	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs495092	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs495642	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4987348	1.00[AFR][1000 genomes]
rs505336	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs506196	0.82[EUR][1000 genomes]
rs510681	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs511443	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs511609	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs517649	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs518928	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs520990	0.82[EUR][1000 genomes]
rs521165	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs522017	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs536080	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs536358	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs536834	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs537976	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs541711	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs544008	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs545954	0.83[EUR][1000 genomes]
rs545963	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs549537	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs553209	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs554060	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs557475	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs558540	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs558782	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs559969	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs560414	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs562054	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs562837	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs565397	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs565626	0.83[EUR][1000 genomes]
rs571806	0.85[EUR][1000 genomes]
rs575147	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs576225	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs578916	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs57952001	0.89[EUR][1000 genomes]
rs579553	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs582900	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs583604	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs590181	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs591202	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs591559	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs593406	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs595984	0.85[EUR][1000 genomes]
rs598763	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs601355	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs602556	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs606047	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs606409	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs607707	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs612548	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs615485	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs615915	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs616789	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs618149	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs629408	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs629421	0.81[AMR][1000 genomes]
rs629593	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs630179	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs638486	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs642352	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs644834	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs646730	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs647113	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs648502	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs654664	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs655133	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs655474	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs656334	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs656848	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs657254	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs659363	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs661516	0.81[AMR][1000 genomes]
rs664598	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs664962	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6681685	0.89[EUR][1000 genomes]
rs671921	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs672843	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs673656	0.85[EUR][1000 genomes]
rs673789	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs674896	0.87[EUR][1000 genomes]
rs675394	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs676020	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs677630	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs680269	0.82[EUR][1000 genomes]
rs685155	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs686519	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs686911	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs687195	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs74122419	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs850771	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9426888	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9645328	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9645329	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3451367	chr1:169630075-169976964	Strong transcription Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	esv1814601	chr1:169782006-169885186	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
3	esv1821503	chr1:169782006-169885186	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
4	esv1847722	chr1:169782006-169885186	Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
5	esv2757760	chr1:169782006-169885186	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
6	esv2758976	chr1:169782006-169885186	Strong transcription Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Enhancers Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
7	nsv428268	chr1:169782006-169885186	Strong transcription ZNF genes & repeats Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
8	esv1845220	chr1:169782006-169933886	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
9	nsv872542	chr1:169802760-169844093	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

mRNA abundance (count:12)

SNP	Gene	Cis/trans	Tissue	Source
rs12124775	C1orf156	Cis_1M	lymphoblastoid	RTeQTL
rs12124775	METTL18	cis	Artery Tibial	GTEx
rs12124775	METTL18	cis	Esophagus Muscularis	GTEx
rs12124775	METTL18	cis	lung	GTEx
rs12124775	METTL18	cis	Muscle Skeletal	GTEx
rs12124775	METTL18	cis	Artery Aorta	GTEx
rs12124775	METTL18	cis	Stomach	GTEx
rs12124775	METTL18	cis	Esophagus Mucosa	GTEx
rs12124775	METTL18	cis	Nerve Tibial	GTEx
rs12124775	METTL18	cis	Thyroid	GTEx
rs12124775	METTL18	cis	Heart Left Ventricle	GTEx
rs12124775	METTL18	cis	Adipose Subcutaneous	GTEx

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:169764800-169818200	Weak transcription	Esophagus	oesophagus
2	chr1:169764800-169818200	Weak transcription	Lung	lung
3	chr1:169764800-169823600	Weak transcription	Gastric	stomach
4	chr1:169765000-169821800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr1:169765200-169818800	Weak transcription	Brain Angular Gyrus	brain
6	chr1:169765200-169820600	Weak transcription	Psoas Muscle	Psoas
7	chr1:169765200-169823400	Weak transcription	Right Ventricle	heart
8	chr1:169765400-169822600	Weak transcription	Colonic Mucosa	Colon
9	chr1:169765600-169818200	Weak transcription	NHLF	lung
10	chr1:169765800-169818400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
11	chr1:169786200-169862400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr1:169786600-169841400	Strong transcription	Dnd41	blood
13	chr1:169788600-169823600	Weak transcription	Pancreas	Pancrea
14	chr1:169789200-169818600	Weak transcription	Brain Cingulate Gyrus	brain
15	chr1:169791200-169841200	Strong transcription	Fetal Thymus	thymus
16	chr1:169793800-169822600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr1:169794200-169818400	Weak transcription	NHEK	skin
18	chr1:169794800-169822000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
19	chr1:169797000-169818200	Weak transcription	Spleen	Spleen
20	chr1:169797600-169818200	Weak transcription	HSMMtube	muscle
21	chr1:169802200-169822600	Weak transcription	Skeletal Muscle Male	skeletal muscle
22	chr1:169802400-169821800	Weak transcription	Colon Smooth Muscle	Colon
23	chr1:169802800-169819800	Weak transcription	Placenta Amnion	Placenta Amnion
24	chr1:169805400-169848800	Strong transcription	Monocytes-CD14+_RO01746	blood
25	chr1:169806400-169820600	Weak transcription	Muscle Satellite Cultured Cells	--
26	chr1:169806600-169860000	Weak transcription	Stomach Mucosa	stomach
27	chr1:169807000-169816600	Weak transcription	NHDF-Ad	bronchial
28	chr1:169808200-169819800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr1:169808200-169822000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr1:169808200-169841200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr1:169808400-169818200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
32	chr1:169808400-169818400	Weak transcription	H9 Cell Line	embryonic stem cell
33	chr1:169808600-169821800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr1:169808600-169827000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr1:169808800-169817800	Weak transcription	Fetal Brain Male	brain
36	chr1:169808800-169818200	Weak transcription	Brain Germinal Matrix	brain
37	chr1:169808800-169818200	Weak transcription	Small Intestine	intestine
38	chr1:169808800-169818600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr1:169808800-169823200	Weak transcription	Fetal Heart	heart
40	chr1:169809200-169817800	Weak transcription	Brain Hippocampus Middle	brain
41	chr1:169809200-169829400	Strong transcription	GM12878-XiMat	blood
42	chr1:169809200-169829600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr1:169809800-169816400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr1:169810000-169828000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
45	chr1:169810400-169841400	Strong transcription	HUES48 Cell Line	embryonic stem cell
46	chr1:169810600-169841200	Strong transcription	Primary monocytes fromperipheralblood	blood
47	chr1:169810800-169817800	Weak transcription	Primary T cells fromperipheralblood	blood
48	chr1:169810800-169817800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
49	chr1:169810800-169841000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr1:169810800-169841200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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