Variant report

Variant	rs518928
Chromosome Location	chr1:169890933-169890934
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:169887846..169894353-chr1:169898169..169903456,7	K562	blood:

Extended variants
information (count: 314 )
Associated
traits (count: 12 )

rSNPs within LD-proxies of this variant (count:311)

rs_ID	r²[population]
rs1046058	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10489173	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10489174	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10489176	0.95[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10494479	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10800489	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10919253	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12116524	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12116601	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12116650	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12117794	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12118080	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12118305	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12118431	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12118559	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12118739	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12119299	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12119368	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12119386	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12119447	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12119473	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12119635	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12119665	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12120114	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12120229	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12120727	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12121045	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12121113	0.95[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12121371	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12121381	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12121443	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12121451	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12121614	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12121797	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12122419	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12122606	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12122720	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12122767	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12122885	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12123432	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12123483	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12123686	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12123806	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12123835	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12123865	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12124032	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12124384	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12124561	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12124750	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12124775	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12124907	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12125023	1.00[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs12125595	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12125679	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12126591	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12127120	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12127174	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12127211	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12127500	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12127911	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12128126	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12128308	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12128929	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12129052	0.91[EUR][1000 genomes]
rs12129164	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12129951	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12130150	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12130263	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12130372	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12130417	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12130472	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12130561	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12131192	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12131206	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12131357	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12131444	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12131603	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12132173	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12132222	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12132384	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12132633	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs12132892	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12133074	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12133108	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12133115	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12133172	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12133369	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12133849	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12134837	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12134886	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12135057	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12135355	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12135361	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12135436	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12135559	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12135642	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12135726	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12136425	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12136554	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12137279	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12137423	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12137487	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12137873	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12138083	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12138861	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12139141	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12139629	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12140134	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12140656	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12140984	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12141317	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12141377	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12141428	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12141572	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12141613	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12141680	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12142093	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12142355	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12142459	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12142511	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12142959	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12142961	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12143057	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12143161	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12143204	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12143260	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12143301	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12143739	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12143781	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12144122	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12144204	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12144207	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12144599	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12144624	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12144683	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12145295	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12145417	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12145458	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12145562	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12145574	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12145614	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12145705	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12146043	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1321657	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1496	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs16828222	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16862751	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16862919	0.88[EUR][1000 genomes]
rs16862956	0.88[EUR][1000 genomes]
rs16862968	0.88[EUR][1000 genomes]
rs17345663	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17349733	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17349740	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17529304	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17529791	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17543370	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17543611	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17543730	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17544586	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17544823	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17593862	1.00[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs17601414	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17601582	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17601631	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17602051	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17602072	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17602610	1.00[AFR][1000 genomes]
rs17602701	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17603570	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17603666	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2057249	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2093050	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2145046	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2183418	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2272919	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2272920	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2272921	0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2421109	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2421110	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2474697	0.87[EUR][1000 genomes]
rs2474698	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2474701	0.82[AMR][1000 genomes]
rs2474704	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2474705	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2474706	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2750018	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2750019	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2806384	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2806385	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2806387	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2806389	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2806390	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2806392	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28652825	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3766135	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3766141	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3766143	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3766152	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs41272481	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs41304562	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4385776	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4519	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs476485	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs478116	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs483103	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs486431	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs490469	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs490776	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs495092	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs495642	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs505336	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs506196	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs510681	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs511443	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs511609	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs517649	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs520990	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs521165	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs522017	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs536080	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs536358	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs536834	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs537976	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs541711	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs544008	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs545284	0.83[EUR][1000 genomes]
rs545954	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs545963	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs549537	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs553209	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs554060	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs557475	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs558540	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs558782	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs559969	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs560414	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs562054	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs562837	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs565397	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs565626	0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs571806	0.94[EUR][1000 genomes]
rs575147	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs576225	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs578916	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs57952001	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs579553	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs582900	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs583604	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs590181	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs591202	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs591559	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs592106	0.82[EUR][1000 genomes]
rs593406	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs595984	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs598763	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs601355	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs602556	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs606047	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs606409	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs606689	0.89[EUR][1000 genomes]
rs606695	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs607707	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs612548	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs615485	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs615915	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs616789	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs618149	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs629408	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs629421	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs629593	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs630179	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs638486	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs642352	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6427231	0.83[EUR][1000 genomes]
rs644834	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs646730	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs647113	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs648502	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs654664	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs655133	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs655474	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs656334	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs656848	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs657254	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs659363	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs661516	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs664598	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs664962	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs665774	0.88[EUR][1000 genomes]
rs6681685	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs671921	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs672843	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs673280	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs673656	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs673789	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs674896	0.97[EUR][1000 genomes]
rs675394	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs676020	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs677630	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs680269	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs685155	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs686519	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs686911	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs687195	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7411424	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs74122419	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7549000	0.86[EUR][1000 genomes]
rs850771	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9426888	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9645328	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9645329	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3451367	chr1:169630075-169976964	Strong transcription Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	esv1845220	chr1:169782006-169933886	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
3	nsv1007190	chr1:169890542-169929582	Enhancers Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

mRNA abundance (count:12)

SNP	Gene	Cis/trans	Tissue	Source
rs518928	METTL18	cis	lung	GTEx
rs518928	METTL18	cis	Artery Tibial	GTEx
rs518928	METTL18	cis	Nerve Tibial	GTEx
rs518928	METTL18	cis	Adipose Subcutaneous	GTEx
rs518928	METTL18	cis	Esophagus Mucosa	GTEx
rs518928	METTL18	cis	Artery Aorta	GTEx
rs518928	METTL18	cis	Stomach	GTEx
rs518928	C1orf156	Cis_1M	lymphoblastoid	RTeQTL
rs518928	METTL18	cis	Heart Left Ventricle	GTEx
rs518928	METTL18	cis	Muscle Skeletal	GTEx
rs518928	METTL18	cis	Esophagus Muscularis	GTEx
rs518928	METTL18	cis	Thyroid	GTEx

Chromatin state (count:46 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:169876200-169903600	Weak transcription	Aorta	Aorta
2	chr1:169878400-169892200	Weak transcription	Duodenum Mucosa	Duodenum
3	chr1:169878400-169895200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr1:169878400-169946200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr1:169878600-169895000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr1:169880200-169892800	Weak transcription	Fetal Heart	heart
7	chr1:169881400-169901000	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr1:169882200-169892000	Weak transcription	Brain Germinal Matrix	brain
9	chr1:169884200-169913000	Weak transcription	Rectal Mucosa Donor 29	rectum
10	chr1:169884400-169891000	Weak transcription	Esophagus	oesophagus
11	chr1:169884600-169892800	Weak transcription	Pancreas	Pancrea
12	chr1:169884600-169895200	Weak transcription	Fetal Intestine Small	intestine
13	chr1:169884600-169900600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr1:169884600-169900600	Weak transcription	NHDF-Ad	bronchial
15	chr1:169885200-169900800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr1:169885400-169894000	Weak transcription	Right Ventricle	heart
17	chr1:169885400-169913200	Weak transcription	Ovary	ovary
18	chr1:169885600-169892200	Weak transcription	Brain Substantia Nigra	brain
19	chr1:169885600-169903200	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr1:169885800-169896600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
21	chr1:169885800-169898000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
22	chr1:169886000-169894000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr1:169886400-169894600	Weak transcription	Primary B cells from cord blood	blood
24	chr1:169886400-169895200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr1:169886400-169913000	Weak transcription	Primary T cells fromperipheralblood	blood
26	chr1:169886600-169915600	Weak transcription	Stomach Smooth Muscle	stomach
27	chr1:169886800-169891000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
28	chr1:169887000-169911400	Weak transcription	Left Ventricle	heart
29	chr1:169888200-169891000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr1:169888200-169891000	Strong transcription	Primary T helper cells fromperipheralblood	blood
31	chr1:169888200-169891000	Strong transcription	Adipose Nuclei	Adipose
32	chr1:169888400-169891000	Weak transcription	Brain Hippocampus Middle	brain
33	chr1:169888400-169892400	Weak transcription	Fetal Brain Male	brain
34	chr1:169888600-169891400	Weak transcription	Primary B cells from peripheral blood	blood
35	chr1:169888600-169891400	Weak transcription	Liver	Liver
36	chr1:169888800-169894800	Weak transcription	GM12878-XiMat	blood
37	chr1:169888800-169900600	Weak transcription	Fetal Stomach	stomach
38	chr1:169889000-169895200	Weak transcription	Duodenum Smooth Muscle	Duodenum
39	chr1:169889400-169891400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
40	chr1:169889600-169900600	Weak transcription	Fetal Lung	lung
41	chr1:169889800-169898000	Weak transcription	Brain Inferior Temporal Lobe	brain
42	chr1:169890200-169891000	Strong transcription	Primary T cells from cord blood	blood
43	chr1:169890200-169895200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
44	chr1:169890800-169893600	Weak transcription	Psoas Muscle	Psoas
45	chr1:169890800-169894800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr1:169890800-169906200	Weak transcription	Primary T helper cells PMA-I stimulated	--

The 2.0 version of rSNPBase

Variant report

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