The 2.0 version of rSNPBase

Variant report

Variant rs12119386
Chromosome Location chr1:169790401-169790402
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169764800-169793200 Weak transcription Aorta Aorta
2 chr1:169764800-169793200 Weak transcription Brain Hippocampus Middle brain
3 chr1:169764800-169793400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:169764800-169795200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr1:169764800-169796200 Weak transcription Spleen Spleen
6 chr1:169764800-169818200 Weak transcription Esophagus oesophagus
7 chr1:169764800-169818200 Weak transcription Lung lung
8 chr1:169764800-169823600 Weak transcription Gastric stomach
9 chr1:169765000-169793200 Weak transcription Fetal Brain Male brain
10 chr1:169765000-169808000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr1:169765000-169821800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr1:169765200-169793200 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:169765200-169793200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:169765200-169793400 Weak transcription Fetal Kidney kidney
15 chr1:169765200-169797400 Weak transcription HSMMtube muscle
16 chr1:169765200-169802000 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr1:169765200-169807800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:169765200-169808000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:169765200-169809000 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr1:169765200-169814800 Weak transcription Brain Anterior Caudate brain
21 chr1:169765200-169815200 Weak transcription Rectal Smooth Muscle rectum
22 chr1:169765200-169818800 Weak transcription Brain Angular Gyrus brain
23 chr1:169765200-169820600 Weak transcription Psoas Muscle Psoas
24 chr1:169765200-169823400 Weak transcription Right Ventricle heart
25 chr1:169765400-169796800 Weak transcription Colon Smooth Muscle Colon
26 chr1:169765400-169798400 Weak transcription Brain Germinal Matrix brain
27 chr1:169765400-169798400 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr1:169765400-169808000 Weak transcription Fetal Heart heart
29 chr1:169765400-169822600 Weak transcription Colonic Mucosa Colon
30 chr1:169765600-169808000 Weak transcription Small Intestine intestine
31 chr1:169765600-169818200 Weak transcription NHLF lung
32 chr1:169765800-169793200 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr1:169765800-169808000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:169765800-169815200 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr1:169765800-169818400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr1:169766000-169796800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:169766000-169797000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:169766000-169797400 Weak transcription Muscle Satellite Cultured Cells --
39 chr1:169773400-169796200 Weak transcription HMEC breast
40 chr1:169773400-169798400 Weak transcription Primary B cells from peripheral blood blood
41 chr1:169773400-169808000 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr1:169773800-169796200 Weak transcription NH-A brain
43 chr1:169773800-169796200 Weak transcription Osteobl bone
44 chr1:169774600-169791000 Weak transcription Placenta Placenta
45 chr1:169774600-169793200 Weak transcription HepG2 liver
46 chr1:169774800-169791200 Weak transcription Fetal Stomach stomach
47 chr1:169774800-169793200 Weak transcription Left Ventricle heart
48 chr1:169774800-169793200 Weak transcription Stomach Smooth Muscle stomach
49 chr1:169774800-169796200 Weak transcription HUVEC blood vessel
50 chr1:169774800-169796400 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015