Variant report

Variant	rs12142093
Chromosome Location	chr1:169843609-169843610
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:169816798..169818330-chr1:169841352..169844284,2	MCF-7	breast:
2	chr1:169837277..169839555-chr1:169841347..169844227,3	MCF-7	breast:
3	chr1:169841592..169844397-chr1:169861385..169863350,2	K562	blood:
4	chr1:169841646..169845084-chr1:169857694..169862794,6	MCF-7	breast:
5	chr1:169837054..169838824-chr1:169842629..169844274,2	K562	blood:

Variant related genes	Relation type
ENSG00000000457	Chromatin interaction

Extended variants
information (count: 369 )
Associated
traits (count: 25 )

rSNPs within LD-proxies of this variant (count:360)

rs_ID	r²[population]
rs1046058	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10489173	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10489174	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10489176	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10494479	1.00[CEU][hapmap];1.00[TSI][hapmap]
rs10800489	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10919253	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12116524	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12116601	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12116650	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12117794	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12118305	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12118431	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12118559	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12118739	0.83[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12119368	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12119386	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12119447	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12119473	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12119635	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12119665	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12120114	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12120229	1.00[CEU][hapmap];0.86[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12120647	0.84[EUR][1000 genomes]
rs12120727	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12121045	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12121113	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12121313	0.84[EUR][1000 genomes]
rs12121371	0.85[AMR][1000 genomes]
rs12121381	0.85[AMR][1000 genomes]
rs12121443	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12121451	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12121606	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs12121614	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12121681	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12121797	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs12122419	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12122582	0.84[EUR][1000 genomes]
rs12122606	0.85[AMR][1000 genomes]
rs12122720	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12122767	1.00[CHB][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];1.00[MKK][hapmap];0.84[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12122776	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]
rs12122781	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]
rs12122885	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12123432	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12123483	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12123686	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12123806	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12123835	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12123865	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12123942	0.84[EUR][1000 genomes]
rs12124032	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12124384	1.00[CEU][hapmap];0.85[AMR][1000 genomes]
rs12124561	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12124750	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12124775	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12124907	1.00[CEU][hapmap];0.86[GIH][hapmap];1.00[TSI][hapmap];0.82[EUR][1000 genomes]
rs12125023	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes]
rs12125595	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.89[TSI][hapmap];0.89[EUR][1000 genomes]
rs12125679	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.89[TSI][hapmap];0.89[EUR][1000 genomes]
rs12126591	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12127120	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs12127174	0.85[AMR][1000 genomes]
rs12127211	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12127500	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12127911	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12128126	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12128308	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12128695	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs12128704	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs12128929	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12129052	0.89[EUR][1000 genomes]
rs12129164	0.85[AMR][1000 genomes]
rs12129443	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs12129951	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12130150	1.00[CEU][hapmap];0.85[AMR][1000 genomes]
rs12130263	0.89[EUR][1000 genomes]
rs12130372	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12130417	0.85[AMR][1000 genomes]
rs12130472	0.85[AMR][1000 genomes]
rs12130561	0.85[AMR][1000 genomes]
rs12130784	0.84[EUR][1000 genomes]
rs12131192	1.00[CEU][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];0.89[TSI][hapmap];0.89[EUR][1000 genomes]
rs12131357	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];0.94[TSI][hapmap];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12131444	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12131603	1.00[CEU][hapmap];1.00[TSI][hapmap]
rs12132173	1.00[CEU][hapmap];0.86[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12132222	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12132384	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12132633	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes]
rs12132692	0.82[EUR][1000 genomes]
rs12132892	0.85[AMR][1000 genomes]
rs12133074	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12133108	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12133115	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs12133172	1.00[CEU][hapmap];0.85[AMR][1000 genomes]
rs12133369	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12133849	0.86[EUR][1000 genomes]
rs12134837	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12134886	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12135057	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12135355	0.85[AMR][1000 genomes]
rs12135361	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12135436	1.00[CEU][hapmap];0.85[AMR][1000 genomes]
rs12135559	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12135642	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12135726	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12136425	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12136554	1.00[CEU][hapmap]
rs12137279	0.85[AMR][1000 genomes]
rs12137423	1.00[CEU][hapmap];0.85[AMR][1000 genomes]
rs12137487	1.00[CEU][hapmap];0.85[AMR][1000 genomes]
rs12137873	0.85[AMR][1000 genomes]
rs12137905	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12138083	0.85[AMR][1000 genomes]
rs12138861	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12139141	1.00[CEU][hapmap]
rs12139629	0.85[AMR][1000 genomes]
rs12140134	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12140656	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12140984	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12141317	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12141428	1.00[CEU][hapmap];0.85[AMR][1000 genomes]
rs12141572	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12141613	0.85[AMR][1000 genomes]
rs12141680	0.85[AMR][1000 genomes]
rs12142355	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12142459	0.85[AMR][1000 genomes]
rs12142511	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12142959	0.85[AMR][1000 genomes]
rs12142961	0.85[AMR][1000 genomes]
rs12143057	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12143161	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12143204	0.85[AMR][1000 genomes]
rs12143260	0.83[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12143301	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12143739	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12143781	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12144122	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12144204	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12144207	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12144599	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12144624	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12144683	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12145295	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12145417	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12145458	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12145504	0.84[EUR][1000 genomes]
rs12145562	0.85[AMR][1000 genomes]
rs12145574	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12145614	1.00[CEU][hapmap];1.00[TSI][hapmap]
rs12145705	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12146043	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1321657	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs1496	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1569457	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs16828207	0.83[AFR][1000 genomes]
rs16828222	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.89[TSI][hapmap];0.89[EUR][1000 genomes]
rs16862751	0.91[CEU][hapmap];0.89[EUR][1000 genomes]
rs16862919	1.00[CEU][hapmap];0.89[TSI][hapmap]
rs16862956	1.00[CEU][hapmap]
rs16862968	1.00[CEU][hapmap];0.89[TSI][hapmap]
rs17345663	1.00[CEU][hapmap]
rs17349733	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17349740	0.82[EUR][1000 genomes]
rs17527744	0.84[EUR][1000 genomes]
rs17529304	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17529791	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17543370	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17543611	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17543730	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17544586	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17544823	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17593568	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes]
rs17593862	0.91[EUR][1000 genomes]
rs17601414	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17601582	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17601631	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17602051	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17602072	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17602701	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17603570	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17603666	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1800015	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs1800016	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs1805193	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs2057249	1.00[CEU][hapmap];0.86[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2093050	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2145046	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2272919	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2272920	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2272921	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2421109	0.85[AMR][1000 genomes]
rs2421110	0.85[AMR][1000 genomes]
rs2474698	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs2474704	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2474705	0.95[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2750018	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2750019	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2806384	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2806385	0.89[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2806387	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2806389	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2806390	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2806392	1.00[CEU][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];0.84[TSI][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs28652825	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3766135	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3766141	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3766143	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3766152	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3917392	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3917399	0.83[AFR][1000 genomes]
rs3917400	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3917410	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs3917411	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs3917417	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3917425	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs3917427	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs3917431	0.83[AFR][1000 genomes]
rs3917441	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3917450	0.83[AFR][1000 genomes]
rs3917452	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs3917453	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs41272481	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs41304562	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4385776	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4519	1.00[CEU][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs476485	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs478116	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs483103	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs486431	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs490469	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs490776	0.83[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs495092	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs495642	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4987289	0.83[AFR][1000 genomes]
rs4987294	0.83[AFR][1000 genomes]
rs4987295	0.83[AFR][1000 genomes]
rs4987299	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs4987302	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4987304	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4987307	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4987308	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4987317	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4987323	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs4987324	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs4987325	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4987340	0.83[CEU][hapmap]
rs4987343	0.83[CEU][hapmap]
rs4987345	0.83[CEU][hapmap]
rs4987363	0.83[CEU][hapmap]
rs4987365	0.83[AFR][1000 genomes]
rs4987383	1.00[ASW][hapmap];1.00[LWK][hapmap]
rs4987395	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs505336	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs506196	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs510681	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs511443	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs511609	1.00[CEU][hapmap];1.00[MKK][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs517649	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs518928	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs520990	0.82[EUR][1000 genomes]
rs521165	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs522017	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs5357	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs536080	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs5361	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs5362	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs5363	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs536358	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs5367	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs536834	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs537976	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs541711	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs544008	1.00[CEU][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs545954	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs545963	1.00[CEU][hapmap];0.94[TSI][hapmap];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs549537	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs553209	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs554060	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55686910	0.83[AFR][1000 genomes]
rs557475	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs558540	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs558782	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs559969	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs560414	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs562054	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs562837	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs565397	1.00[CEU][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs565626	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs571806	0.85[EUR][1000 genomes]
rs575147	1.00[CEU][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs576225	0.90[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs578916	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs57952001	0.89[EUR][1000 genomes]
rs579553	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs582900	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs583604	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs590181	1.00[CEU][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs591202	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs591559	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs593406	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs595984	0.85[EUR][1000 genomes]
rs598763	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs601355	1.00[CEU][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs602556	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs606047	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs606409	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs606689	1.00[CEU][hapmap]
rs606695	0.83[CEU][hapmap]
rs607707	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs612548	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs615485	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs615915	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs616789	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs618149	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs618692	0.83[CEU][hapmap]
rs629408	1.00[CEU][hapmap];0.86[GIH][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs629421	1.00[CEU][hapmap];0.85[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.81[AMR][1000 genomes]
rs629593	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs630179	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs638486	1.00[CEU][hapmap];0.86[GIH][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs642352	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6427231	1.00[CEU][hapmap]
rs644834	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs646730	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs647113	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs648502	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs654664	1.00[CEU][hapmap];0.86[GIH][hapmap];1.00[MKK][hapmap];0.94[TSI][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs655133	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs655474	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs656334	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs656848	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs657254	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs659363	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs661516	0.81[AMR][1000 genomes]
rs664598	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs664962	1.00[CEU][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs665774	1.00[CEU][hapmap]
rs6681685	0.89[EUR][1000 genomes]
rs671921	0.90[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs672843	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs673656	0.85[EUR][1000 genomes]
rs673789	1.00[CEU][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs674896	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs675394	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs676020	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs677630	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs680269	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs685155	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs686519	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs686911	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs687195	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7411424	0.85[AMR][1000 genomes]
rs74122419	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs850771	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs909628	0.83[CEU][hapmap];1.00[MKK][hapmap]
rs9426888	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9645328	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9645329	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3451367	chr1:169630075-169976964	Strong transcription Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	esv1814601	chr1:169782006-169885186	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
3	esv1821503	chr1:169782006-169885186	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
4	esv1847722	chr1:169782006-169885186	Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
5	esv2757760	chr1:169782006-169885186	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
6	esv2758976	chr1:169782006-169885186	Strong transcription Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Enhancers Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
7	nsv428268	chr1:169782006-169885186	Strong transcription ZNF genes & repeats Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
8	esv1845220	chr1:169782006-169933886	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
9	nsv872542	chr1:169802760-169844093	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

mRNA abundance (count:25)

SNP	Gene	Cis/trans	Tissue	Source
rs12142093	METTL18	cis	Artery Aorta	GTEx
rs12142093	METTL18	cis	Artery Tibial	GTEx
rs12142093	MGC9084	cis	multi-tissue	Pritchard
rs12142093	C1orf156	cis	multi-tissue	Pritchard
rs12142093	METTL18	cis	lung	GTEx
rs12142093	METTL18	cis	Nerve Tibial	GTEx
rs12142093	C1orf156	cis	lymphoblastoid	seeQTL
rs12142093	KIFAP3	cis	parietal	SCAN
rs12142093	ILDR2	cis	cerebellum	SCAN
rs12142093	METTL18	cis	Adipose Subcutaneous	GTEx
rs12142093	METTL18	cis	Esophagus Muscularis	GTEx
rs12142093	TIPRL	cis	cerebellum	SCAN
rs12142093	KIFAP3	cis	cerebellum	SCAN
rs12142093	C1orf156	cis	cerebellum	SCAN
rs12142093	SFT2D2	cis	cerebellum	SCAN
rs12142093	C1orf112	cis	multi-tissue	Pritchard
rs12142093	C1orf156	cis	uninvolved skin	skin_eQTL
rs12142093	METTL18	cis	Stomach	GTEx
rs12142093	C1orf156	cis	parietal	SCAN
rs12142093	C1orf156	cis	lesional skin	skin_eQTL
rs12142093	METTL18	cis	Esophagus Mucosa	GTEx
rs12142093	METTL18	cis	Thyroid	GTEx
rs12142093	C1orf112	cis	cerebellum	SCAN
rs12142093	METTL18	cis	Muscle Skeletal	GTEx
rs12142093	METTL18	cis	Heart Left Ventricle	GTEx

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:169786200-169862400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr1:169805400-169848800	Strong transcription	Monocytes-CD14+_RO01746	blood
3	chr1:169806600-169860000	Weak transcription	Stomach Mucosa	stomach
4	chr1:169814400-169848600	Strong transcription	Duodenum Mucosa	Duodenum
5	chr1:169814800-169848000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr1:169815000-169845200	Strong transcription	Rectal Mucosa Donor 31	rectum
7	chr1:169815200-169848200	Strong transcription	Primary T helper cells PMA-I stimulated	--
8	chr1:169815400-169848400	Strong transcription	Primary T helper cells fromperipheralblood	blood
9	chr1:169817800-169848600	Strong transcription	Primary T cells fromperipheralblood	blood
10	chr1:169818200-169847800	Strong transcription	Adipose Nuclei	Adipose
11	chr1:169819000-169848200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr1:169819400-169847000	Strong transcription	Liver	Liver
13	chr1:169820400-169844800	Strong transcription	Duodenum Smooth Muscle	Duodenum
14	chr1:169820400-169847200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr1:169820600-169847800	Strong transcription	Primary neutrophils fromperipheralblood	blood
16	chr1:169820600-169847800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
17	chr1:169820600-169848400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr1:169820600-169848600	Strong transcription	Fetal Lung	lung
19	chr1:169821600-169845200	Strong transcription	Stomach Smooth Muscle	stomach
20	chr1:169822000-169846000	Strong transcription	Primary T helper naive cells from peripheral blood	blood
21	chr1:169822600-169845200	Strong transcription	Skeletal Muscle Male	skeletal muscle
22	chr1:169825600-169845800	Strong transcription	Skeletal Muscle Female	skeletal muscle
23	chr1:169826800-169848600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
24	chr1:169831800-169848400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr1:169833200-169845600	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr1:169833400-169847000	Strong transcription	Left Ventricle	heart
27	chr1:169833800-169860200	Weak transcription	HMEC	breast
28	chr1:169834400-169846200	Strong transcription	HSMM	muscle
29	chr1:169834600-169845400	Strong transcription	Primary T killer memory cells from peripheral blood	blood
30	chr1:169834800-169845200	Strong transcription	Primary T killer naive cells fromperipheralblood	blood
31	chr1:169837400-169848000	Strong transcription	Brain Anterior Caudate	brain
32	chr1:169837800-169845200	Strong transcription	HepG2	liver
33	chr1:169838000-169845000	Strong transcription	Right Ventricle	heart
34	chr1:169838800-169845000	Strong transcription	Brain Cingulate Gyrus	brain
35	chr1:169840000-169846000	Strong transcription	Small Intestine	intestine
36	chr1:169840200-169845200	Strong transcription	Brain Hippocampus Middle	brain
37	chr1:169840400-169846600	Strong transcription	Fetal Stomach	stomach
38	chr1:169840600-169844800	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
39	chr1:169841000-169844000	Strong transcription	Pancreas	Pancrea
40	chr1:169841000-169845400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
41	chr1:169841000-169847200	Strong transcription	Brain Substantia Nigra	brain
42	chr1:169841000-169847400	Strong transcription	Brain Inferior Temporal Lobe	brain
43	chr1:169841200-169843800	ZNF genes & repeats	GM12878-XiMat	blood
44	chr1:169841400-169844800	Strong transcription	Hela-S3	cervix
45	chr1:169841400-169845200	Strong transcription	Fetal Kidney	kidney
46	chr1:169841600-169844200	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
47	chr1:169841600-169847000	Strong transcription	Ovary	ovary
48	chr1:169841600-169847200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
49	chr1:169841800-169844000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
50	chr1:169841800-169844200	Weak transcription	HSMMtube	muscle

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