The 2.0 version of rSNPBase

Variant report

Variant rs12118559
Chromosome Location chr1:169768849-169768850
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169764600-169782400 Weak transcription Pancreas Pancrea
2 chr1:169764800-169769000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:169764800-169793200 Weak transcription Aorta Aorta
4 chr1:169764800-169793200 Weak transcription Brain Hippocampus Middle brain
5 chr1:169764800-169793400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:169764800-169795200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr1:169764800-169796200 Weak transcription Spleen Spleen
8 chr1:169764800-169818200 Weak transcription Esophagus oesophagus
9 chr1:169764800-169818200 Weak transcription Lung lung
10 chr1:169764800-169823600 Weak transcription Gastric stomach
11 chr1:169765000-169776000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:169765000-169786000 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr1:169765000-169793200 Weak transcription Fetal Brain Male brain
14 chr1:169765000-169808000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr1:169765000-169821800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:169765200-169771800 Weak transcription Fetal Muscle Leg muscle
17 chr1:169765200-169771800 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr1:169765200-169772000 Weak transcription Primary B cells from cord blood blood
19 chr1:169765200-169772000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:169765200-169772000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr1:169765200-169772200 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr1:169765200-169772200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr1:169765200-169772200 Weak transcription Adipose Nuclei Adipose
24 chr1:169765200-169772200 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:169765200-169772600 Weak transcription Placenta Placenta
26 chr1:169765200-169772800 Weak transcription Primary T cells fromperipheralblood blood
27 chr1:169765200-169772800 Weak transcription Fetal Muscle Trunk muscle
28 chr1:169765200-169772800 Weak transcription Stomach Smooth Muscle stomach
29 chr1:169765200-169773000 Weak transcription Primary B cells from peripheral blood blood
30 chr1:169765200-169774000 Weak transcription Fetal Intestine Large intestine
31 chr1:169765200-169774200 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:169765200-169774200 Weak transcription Left Ventricle heart
33 chr1:169765200-169774400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr1:169765200-169774400 Weak transcription HSMM muscle
35 chr1:169765200-169776600 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:169765200-169779600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr1:169765200-169781200 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr1:169765200-169781600 Weak transcription Brain Substantia Nigra brain
39 chr1:169765200-169783200 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr1:169765200-169793200 Weak transcription H9 Cell Line embryonic stem cell
41 chr1:169765200-169793200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr1:169765200-169793400 Weak transcription Fetal Kidney kidney
43 chr1:169765200-169797400 Weak transcription HSMMtube muscle
44 chr1:169765200-169802000 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr1:169765200-169807800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:169765200-169808000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:169765200-169809000 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr1:169765200-169814800 Weak transcription Brain Anterior Caudate brain
49 chr1:169765200-169815200 Weak transcription Rectal Smooth Muscle rectum
50 chr1:169765200-169818800 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015