The 2.0 version of rSNPBase

Variant report

Variant rs495642
Chromosome Location chr1:169966047-169966048
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169904000-170010400 Weak transcription Aorta Aorta
2 chr1:169911800-169968400 Weak transcription Psoas Muscle Psoas
3 chr1:169912000-169968600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:169912800-169967200 Weak transcription NHDF-Ad bronchial
5 chr1:169913800-169968400 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:169914000-169968400 Weak transcription Ovary ovary
7 chr1:169914600-169968000 Weak transcription Fetal Stomach stomach
8 chr1:169914800-169984000 Weak transcription Left Ventricle heart
9 chr1:169914800-169984800 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr1:169914800-169988800 Weak transcription Fetal Intestine Small intestine
11 chr1:169921600-169968400 Weak transcription Fetal Brain Male brain
12 chr1:169922000-169984000 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:169922200-169968400 Weak transcription Brain Angular Gyrus brain
14 chr1:169922400-169996400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr1:169930400-169968400 Weak transcription Small Intestine intestine
16 chr1:169935600-169968400 Weak transcription Fetal Kidney kidney
17 chr1:169938000-169968400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr1:169939000-169968400 Weak transcription Brain Inferior Temporal Lobe brain
19 chr1:169939200-169967400 Weak transcription Osteobl bone
20 chr1:169944800-169968000 Weak transcription Brain Substantia Nigra brain
21 chr1:169944800-169989600 Weak transcription Thymus Thymus
22 chr1:169945400-169968400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:169945800-169975000 Weak transcription GM12878-XiMat blood
24 chr1:169946400-169968400 Weak transcription Fetal Muscle Leg muscle
25 chr1:169947000-169968000 Weak transcription Brain Cingulate Gyrus brain
26 chr1:169947200-169968000 Weak transcription Brain Anterior Caudate brain
27 chr1:169948800-169968200 Weak transcription HSMMtube muscle
28 chr1:169949400-169968000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:169951200-169967800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:169951600-170011800 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr1:169951800-169975000 Weak transcription Dnd41 blood
32 chr1:169951800-169975200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:169951800-169984800 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr1:169952000-169983200 Weak transcription Primary T cells fromperipheralblood blood
35 chr1:169952000-169984600 Weak transcription Primary hematopoietic stem cells blood
36 chr1:169952000-169985200 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr1:169952000-170018000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr1:169952200-169983000 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr1:169952400-169967800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:169952400-169983000 Weak transcription Fetal Muscle Trunk muscle
41 chr1:169952400-169984600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:169952400-170043000 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr1:169952600-169975400 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr1:169952600-169984800 Weak transcription Fetal Intestine Large intestine
45 chr1:169953400-169968000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:169954600-169968200 Weak transcription Colon Smooth Muscle Colon
47 chr1:169954800-169968400 Weak transcription Adipose Nuclei Adipose
48 chr1:169955000-169984800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr1:169955600-169984800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:169956800-169997400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015