The 2.0 version of rSNPBase

Variant report

Variant rs616789
Chromosome Location chr1:169963732-169963733
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169904000-170010400 Weak transcription Aorta Aorta
2 chr1:169911800-169968400 Weak transcription Psoas Muscle Psoas
3 chr1:169912000-169966000 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr1:169912000-169968600 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:169912800-169967200 Weak transcription NHDF-Ad bronchial
6 chr1:169913800-169968400 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr1:169914000-169968400 Weak transcription Ovary ovary
8 chr1:169914600-169968000 Weak transcription Fetal Stomach stomach
9 chr1:169914800-169984000 Weak transcription Left Ventricle heart
10 chr1:169914800-169984800 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr1:169914800-169988800 Weak transcription Fetal Intestine Small intestine
12 chr1:169921600-169968400 Weak transcription Fetal Brain Male brain
13 chr1:169922000-169984000 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr1:169922200-169968400 Weak transcription Brain Angular Gyrus brain
15 chr1:169922400-169996400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr1:169930400-169968400 Weak transcription Small Intestine intestine
17 chr1:169935600-169968400 Weak transcription Fetal Kidney kidney
18 chr1:169938000-169968400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:169938200-169965400 Weak transcription Duodenum Mucosa Duodenum
20 chr1:169939000-169968400 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:169939200-169967400 Weak transcription Osteobl bone
22 chr1:169944800-169968000 Weak transcription Brain Substantia Nigra brain
23 chr1:169944800-169989600 Weak transcription Thymus Thymus
24 chr1:169945400-169968400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:169945800-169975000 Weak transcription GM12878-XiMat blood
26 chr1:169946400-169968400 Weak transcription Fetal Muscle Leg muscle
27 chr1:169947000-169968000 Weak transcription Brain Cingulate Gyrus brain
28 chr1:169947200-169968000 Weak transcription Brain Anterior Caudate brain
29 chr1:169948800-169968200 Weak transcription HSMMtube muscle
30 chr1:169949400-169968000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr1:169951200-169967800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:169951600-169965800 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr1:169951600-170011800 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr1:169951800-169965800 Weak transcription Stomach Smooth Muscle stomach
35 chr1:169951800-169975000 Weak transcription Dnd41 blood
36 chr1:169951800-169975200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:169951800-169984800 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr1:169952000-169965600 Weak transcription Primary T cells from cord blood blood
39 chr1:169952000-169983200 Weak transcription Primary T cells fromperipheralblood blood
40 chr1:169952000-169984600 Weak transcription Primary hematopoietic stem cells blood
41 chr1:169952000-169985200 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr1:169952000-170018000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:169952200-169983000 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr1:169952400-169967800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:169952400-169983000 Weak transcription Fetal Muscle Trunk muscle
46 chr1:169952400-169984600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr1:169952400-170043000 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr1:169952600-169975400 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr1:169952600-169984800 Weak transcription Fetal Intestine Large intestine
50 chr1:169952800-169965800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015