Variant report

Variant rs16862751
Chromosome Location chr1:169884386-169884387
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169872800-169887800 Weak transcription Primary T cells from cord blood blood
2 chr1:169875800-169889800 Weak transcription Fetal Brain Female brain
3 chr1:169876200-169903600 Weak transcription Aorta Aorta
4 chr1:169877600-169889800 Weak transcription Lung lung
5 chr1:169878400-169892200 Weak transcription Duodenum Mucosa Duodenum
6 chr1:169878400-169895200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr1:169878400-169946200 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr1:169878600-169895000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:169880200-169892800 Weak transcription Fetal Heart heart
10 chr1:169881000-169888000 Weak transcription Fetal Brain Male brain
11 chr1:169881400-169901000 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr1:169882200-169892000 Weak transcription Brain Germinal Matrix brain
13 chr1:169882800-169886800 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:169883000-169884600 Enhancers HUVEC blood vessel
15 chr1:169883000-169884600 Enhancers NHEK skin
16 chr1:169883000-169886800 Weak transcription Fetal Stomach stomach
17 chr1:169883000-169890600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr1:169883200-169884400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:169883200-169885200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:169883400-169884400 Enhancers Hela-S3 cervix
21 chr1:169883600-169884400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:169883600-169884400 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr1:169883600-169884400 Enhancers NHLF lung
24 chr1:169883800-169884400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:169883800-169884400 Enhancers HSMMtube muscle
26 chr1:169883800-169884600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:169883800-169884800 Flanking Active TSS GM12878-XiMat blood
28 chr1:169884000-169884400 Enhancers A549 lung
29 chr1:169884000-169884400 Enhancers HSMM muscle
30 chr1:169884000-169884400 Flanking Active TSS NHDF-Ad bronchial
31 chr1:169884000-169884400 Flanking Active TSS Osteobl bone
32 chr1:169884000-169884600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:169884000-169884600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:169884000-169884600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:169884000-169884600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:169884000-169884600 Enhancers Small Intestine intestine
37 chr1:169884000-169884600 Enhancers HMEC breast
38 chr1:169884000-169884600 Flanking Active TSS NH-A brain
39 chr1:169884200-169884400 Enhancers iPS-15b Cell Line embryonic stem cell
40 chr1:169884200-169884400 Enhancers Adipose Nuclei Adipose
41 chr1:169884200-169884400 Enhancers Esophagus oesophagus
42 chr1:169884200-169884600 Enhancers Muscle Satellite Cultured Cells --
43 chr1:169884200-169884600 Enhancers Pancreas Pancrea
44 chr1:169884200-169913000 Weak transcription Rectal Mucosa Donor 29 rectum

Quick Search:


  
Input of quick search could be:

what's new

Quick links