Variant report

Variant	rs4630916
Chromosome Location	chr3:43480172-43480173
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs12634274	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1384433	0.83[ASN][1000 genomes]
rs1395372	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1506617	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1588027	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17075630	0.82[EUR][1000 genomes]
rs17075705	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17075743	0.83[ASN][1000 genomes]
rs17075792	0.83[ASN][1000 genomes]
rs2372437	0.83[ASN][1000 genomes]
rs4128529	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4395382	0.83[ASN][1000 genomes]
rs4462942	0.83[ASN][1000 genomes]
rs4510359	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4586783	0.83[ASN][1000 genomes]
rs4682685	0.93[EUR][1000 genomes]
rs4682686	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4682887	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6441772	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6441777	0.83[ASN][1000 genomes]
rs6783741	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6799364	0.83[ASN][1000 genomes]
rs6800983	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7623883	0.93[EUR][1000 genomes]
rs7628317	0.83[ASN][1000 genomes]
rs7631398	0.83[ASN][1000 genomes]
rs9311339	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs977911	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9863943	0.83[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:43443000-43495600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr3:43447800-43481200	Weak transcription	Lung	lung
3	chr3:43455600-43484400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr3:43457000-43492800	Weak transcription	K562	blood
5	chr3:43459800-43496400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr3:43460800-43496400	Weak transcription	HSMM	muscle
7	chr3:43466600-43496400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr3:43473400-43541400	Weak transcription	Aorta	Aorta
9	chr3:43473600-43481000	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr3:43473800-43480400	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr3:43473800-43484600	Weak transcription	Monocytes-CD14+_RO01746	blood
12	chr3:43474200-43480400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr3:43474200-43484600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr3:43474200-43504400	Weak transcription	Duodenum Mucosa	Duodenum
15	chr3:43476400-43484800	Weak transcription	HUVEC	blood vessel
16	chr3:43477400-43481200	Weak transcription	Ovary	ovary
17	chr3:43477600-43485400	Weak transcription	Fetal Lung	lung
18	chr3:43479200-43481200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr3:43479400-43486200	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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