Variant report

Variant	rs5914084
Chromosome Location	chrX:57380914-57380915
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chrX:57311859..57314470-chrX:57378365..57381187,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000165591	Chromatin interaction

Extended variants
information (count: 87 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:87)

rs_ID	r²[population]
rs1048358	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1073967	0.83[CHB][hapmap];0.93[JPT][hapmap]
rs10855185	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1113635	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1116848	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1160711	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs12393264	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs12559310	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs12687268	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12688558	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs12689809	0.87[CHB][hapmap];1.00[JPT][hapmap]
rs12689811	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1367830	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1431677	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1469592	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1560514	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1583200	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1594503	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1594508	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1601317	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1601318	0.88[CHB][hapmap];0.87[JPT][hapmap]
rs1835692	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1835696	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1835698	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1864695	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1864697	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs2015312	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs2060113	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs2116364	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2116365	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2116366	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs2163537	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs2195766	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs2213510	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2499549	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2499550	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2499555	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2516019	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2516020	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2516023	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4030473	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4129399	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4319228	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs4326513	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4557841	0.94[CHB][hapmap];0.93[JPT][hapmap]
rs4587468	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4607761	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4826346	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4826349	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs4826550	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs4826551	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4826553	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs4826568	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs538910	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5914074	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5914085	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5914095	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs5914097	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs5914100	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs5914107	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs5914118	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs5914962	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5914980	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5914993	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5914994	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5914999	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs5915005	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs5915016	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs5915019	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs5915027	0.93[CHB][hapmap];1.00[JPT][hapmap]
rs5915052	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs5960270	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs5960951	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5960956	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5960960	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5960961	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5960969	0.93[CHB][hapmap];0.92[JPT][hapmap]
rs5960970	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5960980	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs6611612	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6611626	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs6612796	0.87[CHB][hapmap]
rs7059676	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs717848	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs7885658	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs957721	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs980735	0.94[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:57375000-57384800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chrX:57375200-57393000	Weak transcription	Pancreas	Pancrea

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