Variant report

Variant	rs7076347
Chromosome Location	chr10:118656647-118656648
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:118655738..118659830-chr10:118661217..118663511,3	MCF-7	breast:
2	chr10:118646540..118648646-chr10:118655970..118657486,2	MCF-7	breast:

Extended variants
information (count: 60 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs10749230	1.00[EUR][1000 genomes]
rs10787731	1.00[EUR][1000 genomes]
rs11812450	0.86[YRI][hapmap];1.00[EUR][1000 genomes]
rs11814798	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11819524	1.00[EUR][1000 genomes]
rs17095392	0.85[YRI][hapmap];1.00[EUR][1000 genomes]
rs17095395	0.95[YRI][hapmap];1.00[EUR][1000 genomes]
rs17095404	0.86[YRI][hapmap];1.00[EUR][1000 genomes]
rs17095418	0.95[YRI][hapmap];1.00[EUR][1000 genomes]
rs17095442	1.00[EUR][1000 genomes]
rs17095444	0.95[YRI][hapmap];0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs17095447	0.95[YRI][hapmap];0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs17095457	1.00[EUR][1000 genomes]
rs17095461	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17095484	1.00[EUR][1000 genomes]
rs17095519	1.00[EUR][1000 genomes]
rs17095827	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs1898345	1.00[EUR][1000 genomes]
rs1905540	1.00[EUR][1000 genomes]
rs1905547	1.00[EUR][1000 genomes]
rs2164656	1.00[EUR][1000 genomes]
rs2901108	1.00[EUR][1000 genomes]
rs4354623	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs4360618	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs4752023	1.00[EUR][1000 genomes]
rs56000111	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs56004012	1.00[EUR][1000 genomes]
rs56916100	1.00[EUR][1000 genomes]
rs58179258	0.83[AFR][1000 genomes]
rs58852191	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs58947347	1.00[EUR][1000 genomes]
rs59036131	1.00[EUR][1000 genomes]
rs60004142	1.00[EUR][1000 genomes]
rs60162197	1.00[EUR][1000 genomes]
rs60882013	1.00[EUR][1000 genomes]
rs61652738	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6585423	1.00[EUR][1000 genomes]
rs7074928	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7090958	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7101129	1.00[EUR][1000 genomes]
rs7101193	0.81[YRI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74159004	1.00[EUR][1000 genomes]
rs74159005	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74159007	1.00[EUR][1000 genomes]
rs74159008	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74159009	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74159010	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74159014	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74159015	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74159016	1.00[EUR][1000 genomes]
rs74159017	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74159018	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74159020	1.00[EUR][1000 genomes]
rs74159021	1.00[EUR][1000 genomes]
rs74161333	1.00[EUR][1000 genomes]
rs74161334	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74161335	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7895011	1.00[EUR][1000 genomes]
rs7903949	1.00[EUR][1000 genomes]
rs9664187	1.00[EUR][1000 genomes]

No data

Chromatin state (count:66 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118637200-118658800	Weak transcription	Pancreas	Pancrea
2	chr10:118637600-118670400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr10:118639000-118666600	Weak transcription	Fetal Intestine Small	intestine
4	chr10:118641800-118658800	Weak transcription	K562	blood
5	chr10:118641800-118665200	Weak transcription	HepG2	liver
6	chr10:118641800-118665400	Weak transcription	Fetal Brain Female	brain
7	chr10:118642600-118670400	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr10:118645400-118673200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
9	chr10:118647400-118680000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr10:118648800-118659000	Weak transcription	Fetal Intestine Large	intestine
11	chr10:118648800-118698600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr10:118649200-118658800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr10:118649200-118658800	Weak transcription	Liver	Liver
14	chr10:118649200-118670400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
15	chr10:118649200-118681200	Weak transcription	Stomach Mucosa	stomach
16	chr10:118649200-118698400	Weak transcription	Esophagus	oesophagus
17	chr10:118649400-118658600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr10:118649400-118665000	Weak transcription	NHEK	skin
19	chr10:118649400-118665200	Weak transcription	Hela-S3	cervix
20	chr10:118650400-118658800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr10:118650600-118659600	Weak transcription	HMEC	breast
22	chr10:118651200-118656800	Weak transcription	NHDF-Ad	bronchial
23	chr10:118651200-118659000	Weak transcription	Aorta	Aorta
24	chr10:118651600-118658800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr10:118651600-118665200	Weak transcription	Adipose Nuclei	Adipose
26	chr10:118651800-118658600	Weak transcription	Brain Germinal Matrix	brain
27	chr10:118651800-118658800	Weak transcription	Brain Angular Gyrus	brain
28	chr10:118651800-118658800	Weak transcription	Brain Inferior Temporal Lobe	brain
29	chr10:118651800-118658800	Weak transcription	Brain Substantia Nigra	brain
30	chr10:118651800-118661200	Weak transcription	Brain Anterior Caudate	brain
31	chr10:118651800-118665800	Weak transcription	NH-A	brain
32	chr10:118651800-118670600	Weak transcription	HSMMtube	muscle
33	chr10:118651800-118689800	Weak transcription	HSMM	muscle
34	chr10:118651800-118706600	Weak transcription	Muscle Satellite Cultured Cells	--
35	chr10:118652000-118671600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
36	chr10:118652000-118736200	Weak transcription	Duodenum Smooth Muscle	Duodenum
37	chr10:118653000-118658800	Weak transcription	Fetal Stomach	stomach
38	chr10:118653000-118658800	Weak transcription	Rectal Mucosa Donor 31	rectum
39	chr10:118653000-118679600	Weak transcription	H1 Cell Line	embryonic stem cell
40	chr10:118653200-118658800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr10:118653200-118658800	Weak transcription	Rectal Mucosa Donor 29	rectum
42	chr10:118653200-118663400	Weak transcription	Fetal Brain Male	brain
43	chr10:118653200-118665200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr10:118653200-118666600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
45	chr10:118653200-118672600	Weak transcription	Gastric	stomach
46	chr10:118653200-118679200	Weak transcription	Duodenum Mucosa	Duodenum
47	chr10:118653200-118684600	Weak transcription	HUES6 Cell Line	embryonic stem cell
48	chr10:118653200-118706800	Weak transcription	H9 Cell Line	embryonic stem cell
49	chr10:118653400-118658600	Weak transcription	Fetal Kidney	kidney
50	chr10:118653400-118658600	Weak transcription	HUVEC	blood vessel

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