The 2.0 version of rSNPBase

Variant report

Variant rs60004142
Chromosome Location chr10:118717852-118717853
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:118652000-118736200 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr10:118699200-118724200 Weak transcription Fetal Intestine Small intestine
3 chr10:118699200-118740600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr10:118699200-118748200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr10:118700000-118736800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr10:118701000-118733400 Weak transcription Fetal Kidney kidney
7 chr10:118702400-118727200 Weak transcription Stomach Mucosa stomach
8 chr10:118703200-118721000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr10:118703400-118720600 Weak transcription Fetal Brain Male brain
10 chr10:118703400-118737000 Weak transcription Aorta Aorta
11 chr10:118703600-118740000 Weak transcription Duodenum Mucosa Duodenum
12 chr10:118703600-118752200 Weak transcription Gastric stomach
13 chr10:118703800-118720800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr10:118704200-118721000 Weak transcription Ovary ovary
15 chr10:118704200-118726600 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr10:118707800-118721000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr10:118708000-118719200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr10:118708000-118719200 Weak transcription NH-A brain
19 chr10:118708000-118719600 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr10:118708000-118725800 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr10:118708000-118726600 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr10:118708000-118735600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr10:118708200-118730800 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr10:118708200-118733200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr10:118708200-118734000 Weak transcription HSMM muscle
26 chr10:118708200-118744000 Weak transcription K562 blood
27 chr10:118708600-118736200 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr10:118710800-118731000 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr10:118711000-118724600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr10:118711000-118724600 Weak transcription HepG2 liver
31 chr10:118711000-118727000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr10:118711000-118735600 Weak transcription Pancreas Pancrea
33 chr10:118711000-118739600 Weak transcription Fetal Stomach stomach
34 chr10:118711200-118718000 Weak transcription Brain Germinal Matrix brain
35 chr10:118711200-118724600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr10:118711200-118724600 Weak transcription Fetal Intestine Large intestine
37 chr10:118711200-118732600 Weak transcription HUVEC blood vessel
38 chr10:118711200-118740000 Weak transcription Adipose Nuclei Adipose
39 chr10:118711400-118720000 Weak transcription Fetal Brain Female brain
40 chr10:118711800-118732200 Weak transcription Hela-S3 cervix
41 chr10:118713000-118732800 Weak transcription HMEC breast
42 chr10:118713200-118719000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr10:118713600-118726600 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr10:118713800-118721000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr10:118713800-118724800 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr10:118713800-118732800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr10:118714200-118718400 Weak transcription A549 lung
48 chr10:118714200-118723200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr10:118714400-118724600 Weak transcription Liver Liver
50 chr10:118714400-118727800 Weak transcription NHEK skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015