Variant report

Variant	rs7124173
Chromosome Location	chr11:15525280-15525281
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:15262063..15264369-chr11:15524628..15526995,2	K562	blood:
2	chr11:15519281..15521349-chr11:15523623..15525618,2	MCF-7	breast:

Extended variants
information (count: 62 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs10741679	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10766261	0.94[ASN][1000 genomes]
rs10766262	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10766265	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10766266	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10766270	0.85[EUR][1000 genomes]
rs10832448	0.85[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs10832449	0.85[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs10832451	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10832458	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10832459	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10832473	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10832477	0.85[EUR][1000 genomes]
rs10832478	0.85[EUR][1000 genomes]
rs11023639	0.85[EUR][1000 genomes]
rs2068036	0.86[EUR][1000 genomes]
rs2351041	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2351049	0.86[EUR][1000 genomes]
rs2351051	0.85[EUR][1000 genomes]
rs2351052	0.85[EUR][1000 genomes]
rs2351054	0.85[EUR][1000 genomes]
rs2351055	0.85[EUR][1000 genomes]
rs2351056	0.85[EUR][1000 genomes]
rs2351058	0.81[EUR][1000 genomes]
rs2882567	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2882568	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2882569	0.87[EUR][1000 genomes]
rs4129901	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4757337	0.86[EUR][1000 genomes]
rs6416166	0.85[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs6486248	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6486255	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6486256	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6486257	0.85[EUR][1000 genomes]
rs6486258	0.83[EUR][1000 genomes]
rs7103348	0.89[ASN][1000 genomes]
rs7107616	0.90[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs7110995	0.85[EUR][1000 genomes]
rs7114130	0.85[EUR][1000 genomes]
rs7116074	0.86[AFR][1000 genomes]
rs7117412	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7119351	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7120823	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7122109	0.85[EUR][1000 genomes]
rs7124172	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7126988	0.86[EUR][1000 genomes]
rs7128205	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7129098	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7480915	0.90[ASN][1000 genomes]
rs7481721	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7483088	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7924910	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7930552	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7935111	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7936873	0.88[EUR][1000 genomes]
rs7937599	0.90[ASN][1000 genomes]
rs7939544	0.86[EUR][1000 genomes]
rs7943582	0.82[EUR][1000 genomes]
rs7947152	0.84[AFR][1000 genomes]
rs7949952	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1809270	chr11:15504338-15528140	Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv17382	chr11:15523863-15525293	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15524600-15525800	Enhancers	Fetal Intestine Large	intestine
2	chr11:15524800-15525400	Enhancers	Fetal Intestine Small	intestine
3	chr11:15525200-15525600	Enhancers	Placenta	Placenta

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