Variant report

Variant	rs72639047
Chromosome Location	chr8:49415598-49415599
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49410603..49416175-chr8:49423365..49428715,9	MCF-7	breast:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10098707	0.81[EUR][1000 genomes]
rs1123189	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs16937564	0.81[EUR][1000 genomes]
rs55656120	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs55811450	0.82[AMR][1000 genomes]
rs55847910	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs55864946	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs55914945	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs55927958	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs56054674	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56308602	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs56348830	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs58223461	0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6989759	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72637700	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72639004	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72639005	0.83[EUR][1000 genomes]
rs72639010	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72639011	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72639012	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72639013	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72639016	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72639020	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72639023	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72639024	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72639025	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72639027	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72639028	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs72639030	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs72639032	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72639052	0.85[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs72639068	0.82[AMR][1000 genomes]
rs72639070	0.85[AMR][1000 genomes]
rs907176	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49413200-49415600	Enhancers	NHDF-Ad	bronchial
2	chr8:49413200-49415800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr8:49413400-49415600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr8:49413400-49415600	Enhancers	Osteobl	bone
5	chr8:49413400-49416800	Enhancers	Fetal Lung	lung
6	chr8:49413600-49418800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr8:49414200-49420000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr8:49414400-49415600	Weak transcription	HSMMtube	muscle
9	chr8:49414400-49416600	Weak transcription	Fetal Muscle Trunk	muscle
10	chr8:49414400-49416600	Weak transcription	Pancreas	Pancrea
11	chr8:49414400-49419800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr8:49414600-49416400	Weak transcription	Hela-S3	cervix
13	chr8:49414600-49416600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr8:49414600-49416600	Weak transcription	Placenta	Placenta
15	chr8:49414600-49416800	Weak transcription	Stomach Mucosa	stomach
16	chr8:49414600-49418600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr8:49414600-49418600	Weak transcription	Fetal Muscle Leg	muscle
18	chr8:49414600-49427000	Weak transcription	Sigmoid Colon	Sigmoid Colon
19	chr8:49414800-49416400	Weak transcription	NHEK	skin
20	chr8:49415400-49415600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr8:49415400-49415600	Enhancers	HSMM	muscle
22	chr8:49415400-49416200	Enhancers	Esophagus	oesophagus
23	chr8:49415400-49416400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr8:49415400-49416600	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr8:49415400-49416600	Weak transcription	A549	lung
26	chr8:49415400-49422000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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