Variant report

Variant	rs72637700
Chromosome Location	chr8:49304624-49304625
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49302521..49305423-chr8:49308458..49310483,2	MCF-7	breast:
2	chr8:49302164..49305075-chr8:49305567..49309028,3	K562	blood:

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs1123189	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55656120	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55811450	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs55847910	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55864946	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55898556	0.82[AMR][1000 genomes]
rs55914945	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55927958	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55962116	0.82[AMR][1000 genomes]
rs56054674	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56152712	0.82[AMR][1000 genomes]
rs56308602	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs56348830	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58223461	0.84[AMR][1000 genomes]
rs6471752	0.85[EUR][1000 genomes]
rs6989759	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72637612	0.82[AMR][1000 genomes]
rs72637676	0.82[AMR][1000 genomes]
rs72637687	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs72637688	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs72637690	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs72637691	0.85[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs72637696	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72637697	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72639004	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72639005	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72639010	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72639011	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72639012	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72639013	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72639016	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72639020	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72639023	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72639024	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72639025	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72639027	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72639028	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72639030	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72639032	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72639047	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72639052	0.84[AMR][1000 genomes]
rs72639068	0.81[AMR][1000 genomes]
rs72639070	0.84[AMR][1000 genomes]
rs907176	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49294600-49308400	Weak transcription	Fetal Lung	lung
2	chr8:49294800-49308800	Weak transcription	NHLF	lung
3	chr8:49294800-49309600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr8:49295000-49309000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:49297800-49306600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr8:49297800-49309200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr8:49298200-49308600	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr8:49303000-49308400	Weak transcription	Ovary	ovary
9	chr8:49303000-49309000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr8:49303000-49309200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr8:49303200-49309000	Weak transcription	NHDF-Ad	bronchial
12	chr8:49303200-49309200	Weak transcription	Osteobl	bone
13	chr8:49303800-49308800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr8:49304000-49308600	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr8:49304400-49304800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr8:49304400-49304800	Enhancers	Esophagus	oesophagus
17	chr8:49304400-49305000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr8:49304400-49308800	Weak transcription	HSMM	muscle
19	chr8:49304600-49304800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr8:49304600-49304800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr8:49304600-49304800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
22	chr8:49304600-49308400	Weak transcription	Fetal Muscle Leg	muscle
23	chr8:49304600-49308800	Weak transcription	Placenta	Placenta
24	chr8:49304600-49309000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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