Variant report

Variant	rs55811450
Chromosome Location	chr8:49301051-49301052
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs1123189	0.83[AMR][1000 genomes]
rs17622439	0.82[ASN][1000 genomes]
rs55656120	0.88[AMR][1000 genomes]
rs55847910	0.94[AMR][1000 genomes]
rs55864946	0.94[AMR][1000 genomes]
rs55898556	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs55902055	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs55914945	0.91[AMR][1000 genomes]
rs55927958	0.94[AMR][1000 genomes]
rs55962116	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56054674	0.88[AMR][1000 genomes]
rs56057107	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56080763	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56152712	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56250422	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56308602	0.88[AMR][1000 genomes]
rs56322760	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56348830	0.91[AMR][1000 genomes]
rs58223461	0.90[AMR][1000 genomes]
rs58429544	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs58735618	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6989759	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72635698	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72635699	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72635700	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72635702	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72637612	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72637676	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72637687	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72637688	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72637690	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72637691	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72637696	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72637697	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72637700	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72639004	0.90[AMR][1000 genomes]
rs72639005	0.82[AMR][1000 genomes]
rs72639010	0.94[AMR][1000 genomes]
rs72639011	0.94[AMR][1000 genomes]
rs72639012	0.94[AMR][1000 genomes]
rs72639013	0.94[AMR][1000 genomes]
rs72639016	0.94[AMR][1000 genomes]
rs72639020	0.94[AMR][1000 genomes]
rs72639023	0.88[AMR][1000 genomes]
rs72639024	0.88[AMR][1000 genomes]
rs72639025	0.88[AMR][1000 genomes]
rs72639027	0.88[AMR][1000 genomes]
rs72639028	0.88[AMR][1000 genomes]
rs72639030	0.88[AMR][1000 genomes]
rs72639032	0.83[AMR][1000 genomes]
rs72639047	0.82[AMR][1000 genomes]
rs72639052	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72639057	0.84[AMR][1000 genomes]
rs72639068	0.87[AMR][1000 genomes]
rs72639070	0.90[AMR][1000 genomes]
rs907176	0.83[AMR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49293800-49303000	Weak transcription	Aorta	Aorta
2	chr8:49294600-49308400	Weak transcription	Fetal Lung	lung
3	chr8:49294800-49302400	Weak transcription	HSMMtube	muscle
4	chr8:49294800-49308800	Weak transcription	NHLF	lung
5	chr8:49294800-49309600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr8:49295000-49309000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr8:49297200-49302200	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr8:49297600-49302200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr8:49297600-49302800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr8:49297800-49302400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr8:49297800-49302400	Weak transcription	NHDF-Ad	bronchial
12	chr8:49297800-49302800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr8:49297800-49303000	Weak transcription	Osteobl	bone
14	chr8:49297800-49304400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr8:49297800-49306600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr8:49297800-49309200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr8:49298200-49308600	Weak transcription	Placenta Amnion	Placenta Amnion

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