The 2.0 version of rSNPBase

Variant report

Variant rs73087444
Chromosome Location chr1:215805009-215805010
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:215741800-215809800 Weak transcription Colonic Mucosa Colon
2 chr1:215750200-215809200 Weak transcription Gastric stomach
3 chr1:215786600-215809400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:215787200-215810200 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:215792400-215810200 Weak transcription Aorta Aorta
6 chr1:215792600-215809800 Weak transcription Pancreas Pancrea
7 chr1:215794400-215810000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:215794600-215808600 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr1:215794600-215809600 Weak transcription H1 Cell Line embryonic stem cell
10 chr1:215794800-215809400 Weak transcription Placenta Placenta
11 chr1:215795800-215809600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:215796000-215808000 Weak transcription Duodenum Mucosa Duodenum
13 chr1:215796000-215809600 Weak transcription Fetal Lung lung
14 chr1:215797000-215805200 Weak transcription Stomach Smooth Muscle stomach
15 chr1:215797000-215809600 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr1:215797400-215806000 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr1:215797400-215809400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:215797600-215809400 Weak transcription Osteobl bone
19 chr1:215797800-215810200 Weak transcription Left Ventricle heart
20 chr1:215798000-215809400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr1:215800000-215809400 Weak transcription NHDF-Ad bronchial
22 chr1:215804200-215805400 Enhancers Liver Liver
23 chr1:215804200-215805600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:215804400-215805200 Enhancers Cortex derived primary cultured neurospheres brain
25 chr1:215804400-215805200 Enhancers Esophagus oesophagus
26 chr1:215804400-215805400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:215804400-215805400 Enhancers NHEK skin
28 chr1:215804400-215805600 Enhancers HepG2 liver
29 chr1:215804400-215806000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:215804600-215805200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:215804600-215805400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr1:215804600-215805400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:215804600-215805400 Enhancers HMEC breast
34 chr1:215804800-215805200 Enhancers ES-WA7 Cell Line embryonic stem cell
35 chr1:215804800-215805200 Enhancers iPS-20b Cell Line embryonic stem cell
36 chr1:215804800-215805200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:215804800-215805200 Enhancers Muscle Satellite Cultured Cells --
38 chr1:215804800-215805400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:215805000-215805200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
40 chr1:215805000-215805200 Enhancers Lung lung
41 chr1:215805000-215805200 Enhancers A549 lung
42 chr1:215805000-215805200 Enhancers HSMM muscle
43 chr1:215805000-215805200 Flanking Active TSS NHLF lung
44 chr1:215805000-215805400 Enhancers Rectal Smooth Muscle rectum
45 chr1:215805000-215806800 Enhancers Fetal Intestine Small intestine
46 chr1:215805000-215809600 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr1:215805000-215809800 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:215805000-215811000 Enhancers Fetal Intestine Large intestine

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Last update: Aug 31, 2015