The 2.0 version of rSNPBase

Variant report

Variant rs2797392
Chromosome Location chr1:215770840-215770841
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:215741800-215786200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:215741800-215809800 Weak transcription Colonic Mucosa Colon
3 chr1:215742000-215786400 Weak transcription Thymus Thymus
4 chr1:215742200-215786400 Weak transcription Primary T cells from cord blood blood
5 chr1:215743000-215772400 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr1:215743200-215785800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:215750000-215772800 Weak transcription Psoas Muscle Psoas
8 chr1:215750000-215778600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:215750000-215786200 Weak transcription Small Intestine intestine
10 chr1:215750000-215805000 Weak transcription Lung lung
11 chr1:215750200-215785800 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:215750200-215786200 Weak transcription Pancreas Pancrea
13 chr1:215750200-215790400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr1:215750200-215795400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:215750200-215796000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:215750200-215804400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:215750200-215809200 Weak transcription Gastric stomach
18 chr1:215752800-215781400 Weak transcription Hela-S3 cervix
19 chr1:215753200-215792200 Weak transcription Aorta Aorta
20 chr1:215753400-215772600 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr1:215753400-215778600 Weak transcription Fetal Thymus thymus
22 chr1:215755800-215776200 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr1:215755800-215804800 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr1:215757000-215782600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr1:215758000-215773200 Weak transcription H1 Cell Line embryonic stem cell
26 chr1:215758200-215772400 Weak transcription Primary B cells from cord blood blood
27 chr1:215758200-215773000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr1:215758400-215772800 Weak transcription Brain Germinal Matrix brain
29 chr1:215758600-215773000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr1:215758600-215781000 Weak transcription Dnd41 blood
31 chr1:215760400-215777000 Weak transcription HUVEC blood vessel
32 chr1:215760400-215786200 Weak transcription Stomach Smooth Muscle stomach
33 chr1:215765200-215790400 Weak transcription Esophagus oesophagus
34 chr1:215766000-215775000 Weak transcription Placenta Placenta
35 chr1:215766400-215772800 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr1:215766400-215786200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr1:215766800-215773000 Weak transcription Fetal Intestine Small intestine
38 chr1:215767400-215771200 Strong transcription Fetal Muscle Leg muscle
39 chr1:215768000-215772000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:215768000-215772600 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr1:215768000-215791800 Weak transcription Fetal Brain Male brain
42 chr1:215768200-215771400 Strong transcription HUES48 Cell Line embryonic stem cell
43 chr1:215768200-215772600 Strong transcription Fetal Lung lung
44 chr1:215768400-215771200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr1:215768400-215772400 Weak transcription Fetal Heart heart
46 chr1:215768400-215772800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:215768400-215772800 Weak transcription Brain Inferior Temporal Lobe brain
48 chr1:215768400-215772800 Weak transcription Brain Substantia Nigra brain
49 chr1:215768400-215772800 Weak transcription Placenta Amnion Placenta Amnion
50 chr1:215768400-215772800 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015