The 2.0 version of rSNPBase

Variant report

Variant rs3753837
Chromosome Location chr1:215755101-215755102
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:215741800-215786200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:215741800-215809800 Weak transcription Colonic Mucosa Colon
3 chr1:215742000-215756000 Weak transcription Primary B cells from peripheral blood blood
4 chr1:215742000-215786400 Weak transcription Thymus Thymus
5 chr1:215742200-215767600 Weak transcription Placenta Amnion Placenta Amnion
6 chr1:215742200-215786400 Weak transcription Primary T cells from cord blood blood
7 chr1:215742400-215757800 Weak transcription Dnd41 blood
8 chr1:215742800-215756600 Weak transcription Primary B cells from cord blood blood
9 chr1:215743000-215772400 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr1:215743200-215785800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:215743600-215755400 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr1:215743800-215756400 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr1:215744200-215767400 Weak transcription Fetal Brain Male brain
14 chr1:215744400-215767600 Weak transcription NHLF lung
15 chr1:215746400-215756800 Weak transcription Right Atrium heart
16 chr1:215746600-215756600 Weak transcription Fetal Heart heart
17 chr1:215746600-215757400 Weak transcription Stomach Mucosa stomach
18 chr1:215746600-215768000 Weak transcription Rectal Smooth Muscle rectum
19 chr1:215747400-215755600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:215747400-215756400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr1:215748000-215755600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:215748000-215758000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:215748000-215764000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:215748200-215755800 Strong transcription HUES48 Cell Line embryonic stem cell
25 chr1:215748200-215757000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:215748200-215757400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:215748200-215757400 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr1:215748200-215760600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:215748400-215755200 Strong transcription H1 Cell Line embryonic stem cell
30 chr1:215748400-215755800 Strong transcription HUES6 Cell Line embryonic stem cell
31 chr1:215748400-215755800 Strong transcription HUES64 Cell Line embryonic stem cell
32 chr1:215748400-215756000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:215748600-215755200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr1:215748600-215755800 Strong transcription Liver Liver
35 chr1:215748800-215757600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:215749000-215755800 Strong transcription NHDF-Ad bronchial
37 chr1:215749400-215755200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:215749400-215755200 Strong transcription Adipose Nuclei Adipose
39 chr1:215749400-215755200 Strong transcription Duodenum Mucosa Duodenum
40 chr1:215749400-215755200 Strong transcription HepG2 liver
41 chr1:215749400-215755800 Strong transcription Osteobl bone
42 chr1:215749400-215756200 Strong transcription iPS-18 Cell Line embryonic stem cell
43 chr1:215749400-215762600 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr1:215749600-215755400 Strong transcription Brain Anterior Caudate brain
45 chr1:215749600-215755400 Strong transcription Rectal Mucosa Donor 29 rectum
46 chr1:215749600-215755800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:215749600-215756200 Strong transcription Rectal Mucosa Donor 31 rectum
48 chr1:215750000-215755800 Strong transcription NH-A brain
49 chr1:215750000-215763200 Weak transcription Brain Cingulate Gyrus brain
50 chr1:215750000-215767600 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015