Variant report

Variant	rs9734327
Chromosome Location	chr11:83340825-83340826
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83333082..83335940-chr11:83337956..83341610,3	K562	blood:

Extended variants
information (count: 57 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:57)

rs_ID	r²[population]
rs10501543	0.80[EUR][1000 genomes]
rs10501544	0.81[EUR][1000 genomes]
rs11233696	0.81[CEU][hapmap];0.80[EUR][1000 genomes]
rs11233697	0.80[EUR][1000 genomes]
rs11233698	0.81[CEU][hapmap];0.80[EUR][1000 genomes]
rs11233703	0.82[JPT][hapmap]
rs11233704	0.96[YRI][hapmap];0.96[AFR][1000 genomes]
rs11233705	0.82[JPT][hapmap];0.96[AFR][1000 genomes]
rs11233711	0.84[CEU][hapmap]
rs11233726	0.81[CEU][hapmap]
rs11233730	0.81[CEU][hapmap]
rs11605382	0.81[CEU][hapmap]
rs12223210	0.81[CEU][hapmap]
rs12225687	0.81[CEU][hapmap]
rs12273560	1.00[CEU][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12273967	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12275022	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12275254	0.82[JPT][hapmap]
rs12276903	0.81[CEU][hapmap]
rs12278831	0.80[EUR][1000 genomes]
rs12280583	0.81[CEU][hapmap]
rs12280692	0.80[EUR][1000 genomes]
rs12282021	1.00[CEU][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12282317	0.81[CEU][hapmap];0.80[EUR][1000 genomes]
rs12291033	0.81[CEU][hapmap];0.81[EUR][1000 genomes]
rs12291743	0.81[CEU][hapmap]
rs12293731	0.81[CEU][hapmap];0.80[EUR][1000 genomes]
rs12294560	0.81[EUR][1000 genomes]
rs1367980	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1432048	0.81[CEU][hapmap];0.80[EUR][1000 genomes]
rs17545474	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2060147	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2116477	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2374447	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4143852	0.82[JPT][hapmap]
rs4480567	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs536489	0.82[JPT][hapmap]
rs57980890	0.81[EUR][1000 genomes]
rs58847848	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs60809470	0.81[EUR][1000 genomes]
rs609948	0.82[JPT][hapmap];0.81[ASN][1000 genomes]
rs616414	0.82[JPT][hapmap]
rs617335	0.82[JPT][hapmap]
rs66819432	0.81[EUR][1000 genomes]
rs67079375	0.91[AFR][1000 genomes]
rs7101642	0.81[CEU][hapmap]
rs7105588	0.82[JPT][hapmap];0.92[YRI][hapmap];0.95[AFR][1000 genomes]
rs7131460	0.82[JPT][hapmap];0.85[YRI][hapmap];0.82[AFR][1000 genomes]
rs725192	0.81[CEU][hapmap];0.80[EUR][1000 genomes]
rs7933908	0.81[CEU][hapmap]
rs7949429	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs919663	0.81[CEU][hapmap];0.80[EUR][1000 genomes]
rs919664	0.80[EUR][1000 genomes]
rs983589	1.00[CEU][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs983590	1.00[CEU][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs984759	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs984760	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83324200-83341200	Weak transcription	Brain Anterior Caudate	brain
2	chr11:83339600-83341800	Enhancers	Fetal Brain Male	brain
3	chr11:83339800-83341400	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:83340200-83341800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr11:83340200-83341800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr11:83340200-83341800	Enhancers	Fetal Heart	heart
7	chr11:83340200-83341800	Enhancers	Hela-S3	cervix
8	chr11:83340200-83342200	Enhancers	Brain Substantia Nigra	brain
9	chr11:83340400-83341000	Enhancers	Brain Cingulate Gyrus	brain
10	chr11:83340400-83341400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr11:83340600-83341200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr11:83340600-83341200	Weak transcription	Fetal Intestine Small	intestine
13	chr11:83340600-83341600	Enhancers	Fetal Lung	lung
14	chr11:83340800-83341000	Enhancers	Brain Inferior Temporal Lobe	brain

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