The 2.0 version of rSNPBase

Variant report

Variant rs10182834
Chromosome Location chr2:20465280-20465281
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20442000-20491000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:20442800-20474800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:20444400-20489000 Weak transcription Stomach Mucosa stomach
4 chr2:20445400-20473800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr2:20445800-20465400 Strong transcription Primary T helper cells fromperipheralblood blood
6 chr2:20446400-20473600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr2:20446800-20465400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
8 chr2:20447000-20465800 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr2:20447000-20468600 Strong transcription Primary T regulatory cells fromperipheralblood blood
10 chr2:20447000-20470200 Strong transcription Dnd41 blood
11 chr2:20452000-20481600 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr2:20454200-20467000 Weak transcription Lung lung
13 chr2:20454200-20471600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:20454200-20480800 Weak transcription Aorta Aorta
15 chr2:20454200-20480800 Weak transcription Psoas Muscle Psoas
16 chr2:20454200-20482800 Weak transcription Pancreas Pancrea
17 chr2:20454200-20488800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr2:20454200-20490800 Weak transcription Right Ventricle heart
19 chr2:20454200-20491000 Weak transcription Gastric stomach
20 chr2:20454200-20491000 Weak transcription Spleen Spleen
21 chr2:20454200-20499600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr2:20454400-20481600 Weak transcription Brain Angular Gyrus brain
23 chr2:20454800-20465800 Weak transcription Fetal Stomach stomach
24 chr2:20454800-20467000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr2:20455200-20467400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr2:20455400-20481600 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr2:20455400-20482600 Weak transcription Ovary ovary
28 chr2:20455800-20481600 Weak transcription Brain Cingulate Gyrus brain
29 chr2:20455800-20485000 Weak transcription Colonic Mucosa Colon
30 chr2:20456400-20482600 Weak transcription H9 Cell Line embryonic stem cell
31 chr2:20456400-20488800 Weak transcription Small Intestine intestine
32 chr2:20456600-20477800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr2:20458000-20491000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr2:20459000-20466000 Strong transcription Primary T cells fromperipheralblood blood
35 chr2:20459800-20467000 Weak transcription NHLF lung
36 chr2:20459800-20467200 Weak transcription Placenta Amnion Placenta Amnion
37 chr2:20459800-20478000 Weak transcription Fetal Heart heart
38 chr2:20459800-20480800 Weak transcription Brain Inferior Temporal Lobe brain
39 chr2:20459800-20481600 Weak transcription Brain Anterior Caudate brain
40 chr2:20459800-20481600 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr2:20460000-20476600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr2:20460000-20480600 Weak transcription Brain Hippocampus Middle brain
43 chr2:20460200-20481000 Weak transcription HMEC breast
44 chr2:20460200-20528600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr2:20460800-20466600 Weak transcription Fetal Muscle Leg muscle
46 chr2:20460800-20467200 Weak transcription Stomach Smooth Muscle stomach
47 chr2:20460800-20471800 Weak transcription HSMMtube muscle
48 chr2:20460800-20480600 Weak transcription Rectal Smooth Muscle rectum
49 chr2:20460800-20481600 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr2:20460800-20485800 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015