The 2.0 version of rSNPBase

Variant report

Variant rs10208668
Chromosome Location chr2:20556151-20556152
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20551600-20568800 Weak transcription Psoas Muscle Psoas
2 chr2:20552000-20556400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr2:20552200-20556400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:20552200-20557600 Weak transcription Primary monocytes fromperipheralblood blood
5 chr2:20552200-20557600 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr2:20552200-20562600 Weak transcription Fetal Muscle Trunk muscle
7 chr2:20552200-20565000 Weak transcription Esophagus oesophagus
8 chr2:20552400-20558800 Weak transcription Stomach Mucosa stomach
9 chr2:20553600-20565000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr2:20553800-20556400 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr2:20554000-20556200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr2:20554200-20562600 Weak transcription Placenta Placenta
13 chr2:20555000-20556400 Enhancers HepG2 liver
14 chr2:20555200-20556400 Enhancers NH-A brain
15 chr2:20555200-20556800 Enhancers HMEC breast
16 chr2:20555400-20556800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr2:20555600-20556200 Enhancers Liver Liver
18 chr2:20555800-20556200 Enhancers HSMM muscle
19 chr2:20555800-20556200 Enhancers NHDF-Ad bronchial
20 chr2:20555800-20556400 Enhancers Cortex derived primary cultured neurospheres brain
21 chr2:20555800-20556400 Enhancers NHLF lung
22 chr2:20555800-20556600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr2:20555800-20556800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr2:20556000-20556200 Enhancers Muscle Satellite Cultured Cells --
25 chr2:20556000-20556200 Enhancers Lung lung
26 chr2:20556000-20556200 Enhancers A549 lung
27 chr2:20556000-20556200 Enhancers NHEK skin
28 chr2:20556000-20556400 Enhancers Primary hematopoietic stem cells short term culture blood
29 chr2:20556000-20556400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr2:20556000-20556400 Enhancers Fetal Muscle Leg muscle
31 chr2:20556000-20556600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr2:20556000-20556600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr2:20556000-20556600 Enhancers Skeletal Muscle Female skeletal muscle
34 chr2:20556000-20556600 Enhancers GM12878-XiMat blood
35 chr2:20556000-20556600 Enhancers Osteobl bone

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Last update: Aug 31, 2015