The 2.0 version of rSNPBase

Variant report

Variant rs62124592
Chromosome Location chr2:20510729-20510730
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20460200-20528600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:20466000-20530400 Strong transcription Fetal Thymus thymus
3 chr2:20467000-20522400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr2:20467200-20526200 Strong transcription Primary monocytes fromperipheralblood blood
5 chr2:20471800-20522600 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr2:20471800-20533800 Strong transcription Dnd41 blood
7 chr2:20474600-20528600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr2:20475400-20522400 Strong transcription Primary neutrophils fromperipheralblood blood
9 chr2:20476200-20514400 Strong transcription iPS-20b Cell Line embryonic stem cell
10 chr2:20476400-20521000 Strong transcription Fetal Intestine Large intestine
11 chr2:20476600-20516400 Strong transcription Primary T regulatory cells fromperipheralblood blood
12 chr2:20476600-20524800 Strong transcription Primary hematopoietic stem cells short term culture blood
13 chr2:20476600-20526600 Strong transcription Rectal Mucosa Donor 29 rectum
14 chr2:20476800-20516800 Strong transcription Primary B cells from peripheral blood blood
15 chr2:20478600-20516600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr2:20480400-20515400 Strong transcription Rectal Mucosa Donor 31 rectum
17 chr2:20483200-20520200 Strong transcription Duodenum Mucosa Duodenum
18 chr2:20483400-20514400 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr2:20488200-20516400 Strong transcription Primary T helper cells fromperipheralblood blood
20 chr2:20488400-20513200 Strong transcription Primary T helper cells PMA-I stimulated --
21 chr2:20488400-20516800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr2:20488400-20517000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr2:20489400-20513000 Weak transcription Stomach Mucosa stomach
24 chr2:20489400-20517400 Weak transcription Psoas Muscle Psoas
25 chr2:20489800-20525800 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr2:20491000-20513400 Strong transcription Primary T cells fromperipheralblood blood
27 chr2:20491400-20522600 Strong transcription HepG2 liver
28 chr2:20491600-20513200 Weak transcription Brain Angular Gyrus brain
29 chr2:20491800-20513600 Strong transcription HUES64 Cell Line embryonic stem cell
30 chr2:20491800-20514800 Weak transcription Gastric stomach
31 chr2:20492400-20513200 Weak transcription Aorta Aorta
32 chr2:20492400-20525800 Strong transcription Liver Liver
33 chr2:20495400-20512200 Strong transcription Primary T cells from cord blood blood
34 chr2:20496200-20513400 Strong transcription GM12878-XiMat blood
35 chr2:20496800-20516400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr2:20497400-20516600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr2:20499200-20527600 Weak transcription Small Intestine intestine
38 chr2:20500200-20522400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr2:20501000-20513200 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr2:20501000-20514000 Strong transcription HUES48 Cell Line embryonic stem cell
41 chr2:20501000-20519600 Strong transcription Breast Myoepithelial Primary Cells Breast
42 chr2:20501600-20525000 Strong transcription Placenta Placenta
43 chr2:20503000-20534600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr2:20504200-20516400 Weak transcription Placenta Amnion Placenta Amnion
45 chr2:20504400-20510800 Weak transcription Fetal Brain Male brain
46 chr2:20504400-20512600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr2:20504600-20512200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr2:20504800-20511800 Strong transcription Duodenum Smooth Muscle Duodenum
49 chr2:20505000-20510800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr2:20505000-20513400 Strong transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015