The 2.0 version of rSNPBase

Variant report

Variant rs73218122
Chromosome Location chr2:20552125-20552126
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20550800-20552200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr2:20550800-20552200 Flanking Active TSS Stomach Smooth Muscle stomach
3 chr2:20550800-20552800 Flanking Active TSS Fetal Brain Male brain
4 chr2:20551000-20552200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
5 chr2:20551000-20552200 Flanking Active TSS Primary B cells from cord blood blood
6 chr2:20551000-20552200 Flanking Active TSS Brain Germinal Matrix brain
7 chr2:20551000-20552400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
8 chr2:20551000-20552800 Flanking Active TSS GM12878-XiMat blood
9 chr2:20551000-20554000 Flanking Active TSS Fetal Brain Female brain
10 chr2:20551200-20552200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr2:20551200-20552200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
12 chr2:20551200-20552200 Flanking Active TSS Primary T cells from cord blood blood
13 chr2:20551200-20552400 Flanking Active TSS HUES64 Cell Line embryonic stem cell
14 chr2:20551200-20552600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
15 chr2:20551400-20552200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr2:20551400-20552200 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr2:20551400-20552200 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr2:20551400-20552200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
19 chr2:20551400-20552200 Enhancers Left Ventricle heart
20 chr2:20551400-20552200 Enhancers Lung lung
21 chr2:20551400-20552400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
22 chr2:20551400-20552400 Flanking Active TSS Dnd41 blood
23 chr2:20551400-20552600 Enhancers Placenta Amnion Placenta Amnion
24 chr2:20551600-20552200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr2:20551600-20552200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr2:20551600-20552200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
27 chr2:20551600-20552200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
28 chr2:20551600-20552200 Enhancers Primary monocytes fromperipheralblood blood
29 chr2:20551600-20552200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr2:20551600-20552200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
31 chr2:20551600-20552200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr2:20551600-20552200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
33 chr2:20551600-20552200 Enhancers Duodenum Smooth Muscle Duodenum
34 chr2:20551600-20552200 Enhancers Fetal Muscle Trunk muscle
35 chr2:20551600-20552200 Enhancers Fetal Stomach stomach
36 chr2:20551600-20552200 Enhancers Right Ventricle heart
37 chr2:20551600-20552400 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr2:20551600-20552400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr2:20551600-20552400 Enhancers Stomach Mucosa stomach
40 chr2:20551600-20552600 Enhancers Primary hematopoietic stem cells blood
41 chr2:20551600-20552600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr2:20551600-20552600 Enhancers Brain Inferior Temporal Lobe brain
43 chr2:20551600-20552600 Enhancers Sigmoid Colon Sigmoid Colon
44 chr2:20551600-20552800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr2:20551600-20552800 Enhancers Colon Smooth Muscle Colon
46 chr2:20551600-20553200 Enhancers Fetal Adrenal Gland Adrenal Gland
47 chr2:20551600-20553400 Enhancers Brain Hippocampus Middle brain
48 chr2:20551600-20553800 Enhancers H9 Cell Line embryonic stem cell
49 chr2:20551600-20553800 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr2:20551600-20553800 Enhancers Fetal Lung lung

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Last update: Aug 31, 2015