The 2.0 version of rSNPBase

Variant report

Variant rs62123439
Chromosome Location chr2:20458982-20458983
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20442000-20491000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:20442800-20474800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:20444400-20489000 Weak transcription Stomach Mucosa stomach
4 chr2:20445400-20463600 Strong transcription Fetal Thymus thymus
5 chr2:20445400-20473800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr2:20445800-20463600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr2:20445800-20465400 Strong transcription Primary T helper cells fromperipheralblood blood
8 chr2:20446000-20463400 Strong transcription iPS-18 Cell Line embryonic stem cell
9 chr2:20446000-20464600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr2:20446000-20464600 Strong transcription HUES48 Cell Line embryonic stem cell
11 chr2:20446200-20459400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:20446200-20463400 Strong transcription Liver Liver
13 chr2:20446200-20464600 Strong transcription Placenta Placenta
14 chr2:20446400-20463400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr2:20446400-20463400 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr2:20446400-20463800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr2:20446400-20473600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr2:20446600-20460400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr2:20446600-20463600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr2:20446800-20463600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr2:20446800-20463600 Strong transcription Duodenum Mucosa Duodenum
22 chr2:20446800-20465400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
23 chr2:20447000-20462400 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr2:20447000-20463400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr2:20447000-20463600 Strong transcription NH-A brain
26 chr2:20447000-20463600 Strong transcription Osteobl bone
27 chr2:20447000-20464000 Strong transcription Primary monocytes fromperipheralblood blood
28 chr2:20447000-20464600 Strong transcription HUES64 Cell Line embryonic stem cell
29 chr2:20447000-20465800 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr2:20447000-20468600 Strong transcription Primary T regulatory cells fromperipheralblood blood
31 chr2:20447000-20470200 Strong transcription Dnd41 blood
32 chr2:20447200-20463200 Strong transcription HSMM muscle
33 chr2:20448000-20463800 Strong transcription iPS-20b Cell Line embryonic stem cell
34 chr2:20448800-20465200 Strong transcription Primary B cells from peripheral blood blood
35 chr2:20450400-20460800 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr2:20452000-20481600 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr2:20452200-20463200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr2:20454000-20459200 Weak transcription Placenta Amnion Placenta Amnion
39 chr2:20454200-20459200 Weak transcription Brain Hippocampus Middle brain
40 chr2:20454200-20460800 Weak transcription Fetal Intestine Small intestine
41 chr2:20454200-20461400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr2:20454200-20467000 Weak transcription Lung lung
43 chr2:20454200-20471600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr2:20454200-20480800 Weak transcription Aorta Aorta
45 chr2:20454200-20480800 Weak transcription Psoas Muscle Psoas
46 chr2:20454200-20482800 Weak transcription Pancreas Pancrea
47 chr2:20454200-20488800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr2:20454200-20490800 Weak transcription Right Ventricle heart
49 chr2:20454200-20491000 Weak transcription Gastric stomach
50 chr2:20454200-20491000 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015