Variant report
| Variant | rs62111437 |
|---|---|
| Chromosome Location | chr2:20436975-20436976 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:20426000-20447000 | Weak transcription | GM12878-XiMat | blood |
| 2 | chr2:20431400-20446800 | Weak transcription | Spleen | Spleen |
| 3 | chr2:20431600-20440600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr2:20431800-20444200 | Weak transcription | A549 | lung |
| 5 | chr2:20431800-20446200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 6 | chr2:20432000-20437200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 7 | chr2:20433000-20440600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 8 | chr2:20433000-20441800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 9 | chr2:20433000-20450200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 10 | chr2:20433000-20451200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 11 | chr2:20435600-20437000 | Enhancers | Placenta Amnion | Placenta Amnion |
| 12 | chr2:20435600-20437200 | Weak transcription | Colonic Mucosa | Colon |
| 13 | chr2:20435800-20437000 | Enhancers | Hela-S3 | cervix |
| 14 | chr2:20436200-20446600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 15 | chr2:20436200-20447000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 16 | chr2:20436400-20437000 | Flanking Active TSS | HMEC | breast |
| 17 | chr2:20436600-20437000 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 18 | chr2:20436600-20437000 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 19 | chr2:20436600-20437000 | Bivalent Enhancer | HepG2 | liver |
| 20 | chr2:20436600-20452600 | Weak transcription | Gastric | stomach |
| 21 | chr2:20436800-20437200 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 22 | chr2:20436800-20437400 | Enhancers | NHEK | skin |
| 23 | chr2:20436800-20437600 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 24 | chr2:20436800-20438200 | Weak transcription | Pancreas | Pancrea |
| 25 | chr2:20436800-20440200 | Weak transcription | Placenta | Placenta |
| 26 | chr2:20436800-20441800 | Weak transcription | Esophagus | oesophagus |
| 27 | chr2:20436800-20445800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
