The 2.0 version of rSNPBase

Variant report

Variant rs62123456
Chromosome Location chr2:20503516-20503517
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20460200-20528600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:20466000-20530400 Strong transcription Fetal Thymus thymus
3 chr2:20467000-20522400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr2:20467200-20526200 Strong transcription Primary monocytes fromperipheralblood blood
5 chr2:20471800-20522600 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr2:20471800-20533800 Strong transcription Dnd41 blood
7 chr2:20474600-20528600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr2:20475400-20522400 Strong transcription Primary neutrophils fromperipheralblood blood
9 chr2:20476200-20514400 Strong transcription iPS-20b Cell Line embryonic stem cell
10 chr2:20476400-20521000 Strong transcription Fetal Intestine Large intestine
11 chr2:20476600-20516400 Strong transcription Primary T regulatory cells fromperipheralblood blood
12 chr2:20476600-20524800 Strong transcription Primary hematopoietic stem cells short term culture blood
13 chr2:20476600-20526600 Strong transcription Rectal Mucosa Donor 29 rectum
14 chr2:20476800-20516800 Strong transcription Primary B cells from peripheral blood blood
15 chr2:20478600-20516600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr2:20480400-20515400 Strong transcription Rectal Mucosa Donor 31 rectum
17 chr2:20483200-20520200 Strong transcription Duodenum Mucosa Duodenum
18 chr2:20483400-20505800 Weak transcription Brain Substantia Nigra brain
19 chr2:20483400-20514400 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr2:20488200-20516400 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr2:20488400-20513200 Strong transcription Primary T helper cells PMA-I stimulated --
22 chr2:20488400-20516800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr2:20488400-20517000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr2:20489200-20505600 Weak transcription H9 Cell Line embryonic stem cell
25 chr2:20489200-20506200 Weak transcription Brain Cingulate Gyrus brain
26 chr2:20489400-20513000 Weak transcription Stomach Mucosa stomach
27 chr2:20489400-20517400 Weak transcription Psoas Muscle Psoas
28 chr2:20489800-20525800 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr2:20491000-20513400 Strong transcription Primary T cells fromperipheralblood blood
30 chr2:20491400-20504000 Strong transcription HUES6 Cell Line embryonic stem cell
31 chr2:20491400-20522600 Strong transcription HepG2 liver
32 chr2:20491600-20513200 Weak transcription Brain Angular Gyrus brain
33 chr2:20491800-20513600 Strong transcription HUES64 Cell Line embryonic stem cell
34 chr2:20491800-20514800 Weak transcription Gastric stomach
35 chr2:20492000-20505000 Weak transcription Stomach Smooth Muscle stomach
36 chr2:20492000-20506800 Weak transcription Right Atrium heart
37 chr2:20492400-20505600 Weak transcription Esophagus oesophagus
38 chr2:20492400-20513200 Weak transcription Aorta Aorta
39 chr2:20492400-20525800 Strong transcription Liver Liver
40 chr2:20493600-20507200 Weak transcription HMEC breast
41 chr2:20494600-20505600 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr2:20495400-20512200 Strong transcription Primary T cells from cord blood blood
43 chr2:20495800-20509600 Strong transcription Primary T helper naive cells fromperipheralblood blood
44 chr2:20496200-20505400 Strong transcription Primary hematopoietic stem cells blood
45 chr2:20496200-20513400 Strong transcription GM12878-XiMat blood
46 chr2:20496800-20505600 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr2:20496800-20516400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr2:20497400-20505600 Weak transcription Brain Hippocampus Middle brain
49 chr2:20497400-20505800 Weak transcription Brain Anterior Caudate brain
50 chr2:20497400-20516600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015