Variant report

Variant	rs12525009
Chromosome Location	chr6:44875843-44875844
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44874731..44877061-chr6:44885216..44887016,2	K562	blood:

Extended variants
information (count: 232 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:227)

rs_ID	r²[population]
rs1023090	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs1023091	0.89[JPT][hapmap];0.81[ASN][1000 genomes]
rs1028944	0.89[JPT][hapmap]
rs1041332	0.89[CHB][hapmap];1.00[JPT][hapmap]
rs1041333	0.88[ASN][1000 genomes]
rs10456119	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10484627	1.00[CEU][hapmap];0.89[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10948176	1.00[YRI][hapmap]
rs10948183	0.90[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs10948185	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10948186	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10948187	0.90[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs10948188	0.80[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.92[ASN][1000 genomes]
rs10948190	0.90[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs10948192	1.00[CEU][hapmap];0.84[JPT][hapmap];0.91[YRI][hapmap];0.92[EUR][1000 genomes]
rs10948193	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10948194	0.90[CHB][hapmap];0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs10948197	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10948198	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs1150806	0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs11524119	0.80[AFR][1000 genomes];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1159131	0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs11964325	0.89[CHB][hapmap];1.00[JPT][hapmap]
rs11966936	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs11967188	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12190136	0.81[ASN][1000 genomes]
rs12190513	0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12191518	0.95[ASN][1000 genomes]
rs12192367	0.84[CHB][hapmap]
rs12196818	0.92[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12197442	0.87[ASN][1000 genomes]
rs12198904	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12200412	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12205071	0.84[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs12207620	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12208023	0.84[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs12208339	0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12209076	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12214778	0.92[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12215263	1.00[YRI][hapmap]
rs12524069	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12525773	0.83[ASN][1000 genomes]
rs12526649	0.90[JPT][hapmap]
rs12526711	0.89[CHB][hapmap];0.89[JPT][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12526755	0.84[ASN][1000 genomes]
rs12527908	0.86[ASN][1000 genomes]
rs12528232	0.89[JPT][hapmap];0.81[ASN][1000 genomes]
rs12528762	0.90[JPT][hapmap]
rs12529490	0.84[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap]
rs12529522	0.84[JPT][hapmap];0.84[ASN][1000 genomes]
rs12529990	0.90[JPT][hapmap]
rs12530016	0.84[JPT][hapmap];0.83[ASN][1000 genomes]
rs12661902	0.83[ASN][1000 genomes]
rs12663530	0.83[ASN][1000 genomes]
rs12663798	0.84[ASN][1000 genomes]
rs1284986	0.89[JPT][hapmap]
rs1284987	0.84[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs1284988	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs1284992	0.84[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs1293457	0.81[ASN][1000 genomes]
rs1293467	0.81[ASN][1000 genomes]
rs1293598	0.95[ASN][1000 genomes]
rs1293600	0.90[ASN][1000 genomes]
rs13196587	0.91[ASN][1000 genomes]
rs13199289	0.87[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs13201942	0.89[JPT][hapmap]
rs13202529	0.84[ASN][1000 genomes]
rs13203495	0.91[ASN][1000 genomes]
rs13205113	0.90[JPT][hapmap]
rs13209827	0.90[JPT][hapmap]
rs13211006	0.89[JPT][hapmap]
rs13211229	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13213412	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13215618	0.90[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs13216116	0.95[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs13216967	0.81[ASN][1000 genomes]
rs1324532	0.83[CEU][hapmap];0.83[CHB][hapmap];1.00[JPT][hapmap]
rs1329710	0.95[CHB][hapmap];0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs1329713	0.90[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs1329714	0.87[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.84[ASN][1000 genomes]
rs1329715	0.89[JPT][hapmap];0.84[ASN][1000 genomes]
rs1329716	0.90[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs1360195	0.89[JPT][hapmap];0.84[ASN][1000 genomes]
rs1360197	0.95[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs1411148	0.89[CHB][hapmap];1.00[JPT][hapmap]
rs1521355	0.95[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs1557143	0.81[ASN][1000 genomes]
rs1576382	0.90[ASN][1000 genomes]
rs1578676	0.96[ASN][1000 genomes]
rs1590864	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17339124	0.91[ASN][1000 genomes]
rs17422760	0.89[CHB][hapmap];0.94[JPT][hapmap];0.97[ASN][1000 genomes]
rs17424547	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1831310	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1854547	0.90[ASN][1000 genomes]
rs1891411	0.81[ASN][1000 genomes]
rs1891412	0.81[ASN][1000 genomes]
rs1935551	0.81[ASN][1000 genomes]
rs1937046	0.84[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs1971482	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1980265	0.90[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs2186062	0.84[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs227849	0.84[CHB][hapmap]
rs2396369	0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs2396370	0.90[ASN][1000 genomes]
rs2396371	0.90[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs2396372	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2396375	0.83[ASN][1000 genomes]
rs34243039	0.81[ASN][1000 genomes]
rs34286542	0.83[ASN][1000 genomes]
rs34808716	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34982599	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35103634	0.84[ASN][1000 genomes]
rs35357222	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35687006	0.89[JPT][hapmap];0.83[ASN][1000 genomes]
rs35704584	0.84[ASN][1000 genomes]
rs35813980	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35856781	0.81[ASN][1000 genomes]
rs35908738	0.83[ASN][1000 genomes]
rs36105034	0.83[ASN][1000 genomes]
rs3778507	0.90[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs3799967	0.89[CHB][hapmap];0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs3799968	0.84[CHB][hapmap]
rs3799971	0.85[CHB][hapmap];0.89[JPT][hapmap];0.91[ASN][1000 genomes]
rs3799973	0.81[CEU][hapmap];0.89[CHB][hapmap];0.88[JPT][hapmap];0.92[YRI][hapmap];0.93[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs3799974	0.81[ASN][1000 genomes]
rs3799976	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3799977	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3799979	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3799981	0.95[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs3799984	0.95[CHB][hapmap];0.95[JPT][hapmap];0.93[ASN][1000 genomes]
rs3799986	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs3799987	0.89[JPT][hapmap];0.84[ASN][1000 genomes]
rs3846896	0.95[ASN][1000 genomes]
rs3957281	0.96[ASN][1000 genomes]
rs4398713	0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs4412189	0.85[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs4475320	0.84[ASN][1000 genomes]
rs4512220	0.90[JPT][hapmap];0.83[ASN][1000 genomes]
rs4711799	0.81[ASN][1000 genomes]
rs4711803	0.98[ASN][1000 genomes]
rs4711805	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4711807	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4711809	0.82[CHB][hapmap];0.81[ASN][1000 genomes]
rs4714821	0.81[ASN][1000 genomes]
rs4714827	0.81[ASN][1000 genomes]
rs4714828	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4714829	0.84[ASN][1000 genomes]
rs4714830	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4714832	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4714834	0.89[JPT][hapmap];0.81[ASN][1000 genomes]
rs4714836	0.84[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs472672	0.87[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs472673	0.90[ASN][1000 genomes]
rs494982	0.90[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs500773	0.86[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs538801	0.95[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs55893720	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs567054	0.86[ASN][1000 genomes]
rs588848	0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs59945128	0.84[ASN][1000 genomes]
rs608941	0.95[CHB][hapmap];0.94[JPT][hapmap];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs62438007	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62438011	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs634789	0.80[ASN][1000 genomes]
rs636845	0.90[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs6458414	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6458415	0.90[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs67001335	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs67911131	0.84[ASN][1000 genomes]
rs679713	0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6899845	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs6903576	0.95[ASN][1000 genomes]
rs6904015	0.84[CHB][hapmap];0.81[ASN][1000 genomes]
rs6904584	0.86[ASN][1000 genomes]
rs6910294	0.90[CHB][hapmap];0.84[JPT][hapmap];0.82[ASN][1000 genomes]
rs6910749	0.81[ASN][1000 genomes]
rs6919161	0.89[JPT][hapmap];0.84[ASN][1000 genomes]
rs6919485	0.91[ASN][1000 genomes]
rs6922660	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs6922772	0.84[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs6923519	0.95[ASN][1000 genomes]
rs6924185	0.92[YRI][hapmap]
rs6925017	0.95[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs6925467	0.87[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs718112	0.97[ASN][1000 genomes]
rs7739928	0.89[CHB][hapmap];1.00[JPT][hapmap]
rs7742360	0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs7745506	0.89[JPT][hapmap]
rs7747642	0.95[ASN][1000 genomes]
rs7749865	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7754378	0.90[CHB][hapmap];0.94[JPT][hapmap];0.97[ASN][1000 genomes]
rs7754698	0.84[CHB][hapmap];0.81[ASN][1000 genomes]
rs7763421	0.84[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs7763450	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs7775717	0.95[CHB][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]
rs929614	0.81[ASN][1000 genomes]
rs9296450	0.84[JPT][hapmap];0.83[ASN][1000 genomes]
rs9357459	0.81[ASN][1000 genomes]
rs9357464	0.95[CHB][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]
rs9357469	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs9357470	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs9367208	0.87[ASN][1000 genomes]
rs9367210	1.00[YRI][hapmap]
rs9367211	0.84[CHB][hapmap];0.94[JPT][hapmap];0.96[ASN][1000 genomes]
rs9367214	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs9369512	0.81[ASN][1000 genomes]
rs9369513	0.81[ASN][1000 genomes]
rs9369514	0.84[CHB][hapmap];0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs9369516	0.90[CHB][hapmap];0.94[JPT][hapmap];0.95[ASN][1000 genomes]
rs9369529	0.85[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs9395049	0.89[CHB][hapmap];0.83[ASN][1000 genomes]
rs9395051	0.84[CHB][hapmap];0.89[JPT][hapmap];0.91[ASN][1000 genomes]
rs9395055	0.94[ASN][1000 genomes]
rs9395058	0.83[ASN][1000 genomes]
rs9395065	0.88[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs9463054	0.91[ASN][1000 genomes]
rs9463055	0.89[ASN][1000 genomes]
rs9472383	0.83[ASN][1000 genomes]
rs9472407	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9472409	0.90[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs9472411	0.91[ASN][1000 genomes]
rs9472414	0.90[JPT][hapmap];0.83[ASN][1000 genomes]
rs9472416	0.90[CHB][hapmap];0.95[JPT][hapmap];0.91[ASN][1000 genomes]
rs969211	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs976699	0.90[CHB][hapmap];0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs9885796	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv885861	chr6:44837356-45043618	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1033815	chr6:44845514-44938799	Enhancers Strong transcription Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv5286	chr6:44865290-44909915	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv1028393	chr6:44875558-45822335	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
5	nsv538211	chr6:44875558-45822335	ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs12525009	SUPT3H	Cis_1M	lymphoblastoid	RTeQTL
rs12525009	SUPT3H	cis	multi-tissue	Pritchard

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44859200-44889400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr6:44862600-44889400	Weak transcription	Primary T cells fromperipheralblood	blood
3	chr6:44864800-44888400	Weak transcription	Primary T cells from cord blood	blood
4	chr6:44866600-44879600	Weak transcription	Pancreas	Pancrea
5	chr6:44873200-44888000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
6	chr6:44874800-44889400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr6:44875000-44888800	Weak transcription	Primary T helper cells PMA-I stimulated	--

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