Variant report

Variant	rs2879361
Chromosome Location	chr8:91481909-91481910
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs10086488	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10094978	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10111060	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10112242	0.81[CEU][hapmap]
rs1015994	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1028255	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1033347	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1033348	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10504894	0.92[CEU][hapmap];0.96[JPT][hapmap];0.86[EUR][1000 genomes]
rs12545726	0.80[EUR][1000 genomes]
rs12674903	0.92[EUR][1000 genomes]
rs12678527	0.92[CEU][hapmap];0.87[JPT][hapmap];0.87[EUR][1000 genomes]
rs12679836	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13268721	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2023624	0.80[CEU][hapmap]
rs2105965	0.81[CEU][hapmap];0.81[EUR][1000 genomes]
rs2142146	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2142147	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2205150	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2205151	0.96[CEU][hapmap];0.95[JPT][hapmap];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2205152	0.96[CEU][hapmap];0.95[JPT][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2223010	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2285231	0.81[EUR][1000 genomes]
rs35361206	0.81[EUR][1000 genomes]
rs35816262	0.92[EUR][1000 genomes]
rs3950221	0.96[CEU][hapmap];0.91[JPT][hapmap];0.95[EUR][1000 genomes]
rs4495387	0.81[CEU][hapmap]
rs4734237	0.81[EUR][1000 genomes]
rs4735190	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4735201	0.92[CEU][hapmap];0.86[JPT][hapmap];0.85[EUR][1000 genomes]
rs56784954	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6471084	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6471085	0.90[EUR][1000 genomes]
rs6471105	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6471113	0.81[CEU][hapmap];0.91[JPT][hapmap];0.85[EUR][1000 genomes]
rs6982329	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6986088	0.81[EUR][1000 genomes]
rs6986165	0.84[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.82[YRI][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6988302	1.00[CEU][hapmap];0.91[CHB][hapmap];0.96[JPT][hapmap];0.83[YRI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6988733	0.81[EUR][1000 genomes]
rs6992512	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6993715	0.86[EUR][1000 genomes]
rs6995399	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6998106	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7000724	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7002775	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.95[YRI][hapmap];0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7017295	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7017630	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs715057	0.81[CEU][hapmap]
rs7812970	0.81[EUR][1000 genomes]
rs7817954	0.81[EUR][1000 genomes]
rs7821069	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7824376	0.92[CEU][hapmap];0.87[JPT][hapmap];0.87[EUR][1000 genomes]
rs7824511	0.92[CEU][hapmap];0.87[JPT][hapmap];0.87[EUR][1000 genomes]
rs7824956	0.89[EUR][1000 genomes]
rs7837109	0.81[CEU][hapmap]
rs9297857	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9642910	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9643295	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91480400-91483400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr8:91480400-91483600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr8:91480400-91483600	Weak transcription	NH-A	brain
4	chr8:91480400-91483800	Weak transcription	Osteobl	bone
5	chr8:91480600-91483600	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr8:91480600-91483600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr8:91480600-91483600	Weak transcription	NHDF-Ad	bronchial
8	chr8:91480600-91484000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr8:91480600-91484800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr8:91480600-91491200	Weak transcription	Liver	Liver
11	chr8:91480800-91483600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr8:91481000-91483600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr8:91481000-91483600	Weak transcription	HMEC	breast
14	chr8:91481200-91483600	Weak transcription	HSMM	muscle
15	chr8:91481800-91483400	Weak transcription	Hela-S3	cervix

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