Variant report

Variant	rs6993715
Chromosome Location	chr8:91531188-91531189
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:91530400..91534566-chr8:91534971..91538885,4	MCF-7	breast:
2	chr8:91526432..91528878-chr8:91531076..91533715,2	K562	blood:

Extended variants
information (count: 73 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:72)

rs_ID	r²[population]
rs10086488	0.81[EUR][1000 genomes]
rs10094978	0.81[EUR][1000 genomes]
rs10105142	0.86[EUR][1000 genomes]
rs10111060	0.81[JPT][hapmap];0.80[EUR][1000 genomes]
rs1028255	0.86[EUR][1000 genomes]
rs10504894	0.98[EUR][1000 genomes]
rs10956720	0.86[EUR][1000 genomes]
rs11776824	0.85[EUR][1000 genomes]
rs12545726	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12674903	0.88[EUR][1000 genomes]
rs12678527	0.82[JPT][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13254212	0.86[EUR][1000 genomes]
rs13255452	0.86[EUR][1000 genomes]
rs13267989	0.86[EUR][1000 genomes]
rs13268594	0.81[EUR][1000 genomes]
rs13268721	0.89[EUR][1000 genomes]
rs1476427	0.92[EUR][1000 genomes]
rs1476428	0.85[EUR][1000 genomes]
rs1858674	0.85[EUR][1000 genomes]
rs2073640	0.81[EUR][1000 genomes]
rs2105965	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2105967	0.82[EUR][1000 genomes]
rs2157607	0.81[EUR][1000 genomes]
rs2187981	0.85[EUR][1000 genomes]
rs2187982	0.92[EUR][1000 genomes]
rs2205150	0.80[EUR][1000 genomes]
rs2205151	0.89[EUR][1000 genomes]
rs2205152	0.89[EUR][1000 genomes]
rs2213886	0.85[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs2223010	0.85[EUR][1000 genomes]
rs2285231	0.99[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2285233	0.81[EUR][1000 genomes]
rs2879361	0.86[EUR][1000 genomes]
rs34126139	0.86[EUR][1000 genomes]
rs35159732	0.83[EUR][1000 genomes]
rs35361206	0.90[EUR][1000 genomes]
rs35816262	0.91[EUR][1000 genomes]
rs36046037	0.80[EUR][1000 genomes]
rs3950221	0.89[EUR][1000 genomes]
rs4734237	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4735190	0.91[EUR][1000 genomes]
rs4735201	0.86[JPT][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4735210	0.85[EUR][1000 genomes]
rs4735230	0.86[EUR][1000 genomes]
rs56784954	0.90[EUR][1000 genomes]
rs6471085	0.84[EUR][1000 genomes]
rs6471113	0.95[CHB][hapmap];0.86[JPT][hapmap];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6986001	0.81[EUR][1000 genomes]
rs6986088	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6986689	0.80[EUR][1000 genomes]
rs6988302	0.86[EUR][1000 genomes]
rs6988733	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6989123	0.85[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs6995399	0.86[EUR][1000 genomes]
rs6998106	0.80[EUR][1000 genomes]
rs7000724	0.94[EUR][1000 genomes]
rs7002775	0.83[EUR][1000 genomes]
rs7013893	0.86[EUR][1000 genomes]
rs7017295	0.81[JPT][hapmap];0.86[EUR][1000 genomes]
rs7017630	0.86[EUR][1000 genomes]
rs7812970	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7817954	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7823461	0.86[EUR][1000 genomes]
rs7824376	0.82[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7824511	0.82[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7826178	0.81[EUR][1000 genomes]
rs7837230	0.86[EUR][1000 genomes]
rs7840846	0.86[EUR][1000 genomes]
rs9297857	0.84[EUR][1000 genomes]
rs9642910	0.83[EUR][1000 genomes]
rs9643295	0.80[EUR][1000 genomes]
rs9643298	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv981885	chr8:91528144-91537088	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91522000-91532400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:91530600-91532000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr8:91531000-91532800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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