Variant report

Variant	rs10105142
Chromosome Location	chr8:91547420-91547421
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:91544462..91546603-chr8:91546788..91549297,3	MCF-7	breast:
2	chr8:91546503..91548610-chr8:91549593..91551620,2	K562	blood:

Extended variants
information (count: 90 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:90)

rs_ID	r²[population]
rs10086401	0.91[EUR][1000 genomes]
rs10086462	0.92[EUR][1000 genomes]
rs10086488	0.83[EUR][1000 genomes]
rs10091275	0.92[EUR][1000 genomes]
rs10094978	0.82[EUR][1000 genomes]
rs10103198	0.92[EUR][1000 genomes]
rs10111060	0.88[TSI][hapmap];0.82[EUR][1000 genomes]
rs10504894	0.85[EUR][1000 genomes]
rs10956720	0.85[EUR][1000 genomes]
rs10956730	0.92[CEU][hapmap];0.86[EUR][1000 genomes]
rs10956736	0.86[EUR][1000 genomes]
rs10956750	0.84[CEU][hapmap]
rs11776824	0.99[EUR][1000 genomes]
rs11784529	0.84[CEU][hapmap]
rs12545726	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12547016	0.91[EUR][1000 genomes]
rs12548806	0.91[EUR][1000 genomes]
rs12678527	0.86[EUR][1000 genomes]
rs12680211	0.84[TSI][hapmap]
rs13254212	0.85[EUR][1000 genomes]
rs13255452	0.83[CEU][hapmap];0.85[EUR][1000 genomes]
rs13262354	0.84[CEU][hapmap];0.84[TSI][hapmap]
rs13267237	0.90[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs13267989	0.85[EUR][1000 genomes]
rs13268594	0.81[EUR][1000 genomes]
rs13277387	0.84[CEU][hapmap]
rs1476427	0.91[EUR][1000 genomes]
rs1476428	0.99[EUR][1000 genomes]
rs1858673	0.92[EUR][1000 genomes]
rs1858674	0.84[CEU][hapmap];0.86[EUR][1000 genomes]
rs2023626	0.84[CEU][hapmap]
rs2073640	0.84[CEU][hapmap];0.81[GIH][hapmap];0.86[TSI][hapmap];0.80[EUR][1000 genomes]
rs2105965	0.84[CEU][hapmap];0.82[CHB][hapmap];0.95[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2105967	0.86[CEU][hapmap];0.82[EUR][1000 genomes]
rs2105968	0.92[CEU][hapmap];0.86[EUR][1000 genomes]
rs2157607	0.80[EUR][1000 genomes]
rs2187981	0.99[EUR][1000 genomes]
rs2187982	0.91[EUR][1000 genomes]
rs2187983	0.87[TSI][hapmap]
rs2205150	0.82[EUR][1000 genomes]
rs2205151	0.86[TSI][hapmap]
rs2205152	0.86[TSI][hapmap]
rs2213886	0.91[EUR][1000 genomes]
rs2285231	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2285232	0.92[EUR][1000 genomes]
rs34126139	0.85[EUR][1000 genomes]
rs4140679	0.92[CEU][hapmap];0.91[TSI][hapmap];0.88[EUR][1000 genomes]
rs4140680	0.96[CEU][hapmap];0.89[EUR][1000 genomes]
rs4495387	0.84[CEU][hapmap]
rs4734237	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4734250	0.92[CEU][hapmap];0.88[TSI][hapmap];0.86[EUR][1000 genomes]
rs4734269	0.84[CEU][hapmap]
rs4735201	0.95[TSI][hapmap];0.85[EUR][1000 genomes]
rs4735210	0.99[EUR][1000 genomes]
rs4735230	0.85[EUR][1000 genomes]
rs4735236	0.92[CEU][hapmap];0.89[EUR][1000 genomes]
rs5005585	0.92[EUR][1000 genomes]
rs6471113	0.84[CEU][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6986088	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6986165	0.84[TSI][hapmap];0.80[EUR][1000 genomes]
rs6986359	0.82[TSI][hapmap]
rs6986689	0.84[CEU][hapmap]
rs6988733	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6989123	0.91[EUR][1000 genomes]
rs6992512	0.81[EUR][1000 genomes]
rs6993715	0.86[EUR][1000 genomes]
rs6998106	0.82[EUR][1000 genomes]
rs7000724	0.82[EUR][1000 genomes]
rs7002775	0.82[TSI][hapmap]
rs7006279	0.85[EUR][1000 genomes]
rs7008172	0.89[EUR][1000 genomes]
rs7008765	0.81[TSI][hapmap]
rs7012741	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7013893	0.85[EUR][1000 genomes]
rs7014967	0.92[EUR][1000 genomes]
rs7016220	0.88[CEU][hapmap];0.85[EUR][1000 genomes]
rs7017295	0.86[TSI][hapmap]
rs756568	0.92[EUR][1000 genomes]
rs7812970	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7817954	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7819519	0.92[EUR][1000 genomes]
rs7823461	0.84[CEU][hapmap];0.85[EUR][1000 genomes]
rs7824376	0.86[EUR][1000 genomes]
rs7824511	0.86[EUR][1000 genomes]
rs7837230	0.85[EUR][1000 genomes]
rs7840846	0.85[EUR][1000 genomes]
rs9297871	0.91[EUR][1000 genomes]
rs9642910	0.82[TSI][hapmap]
rs9643295	0.82[EUR][1000 genomes]
rs9643298	0.91[EUR][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91544800-91552400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr8:91545400-91550000	Enhancers	HSMM	muscle
3	chr8:91545600-91550000	Enhancers	NHEK	skin
4	chr8:91545800-91547600	Enhancers	Muscle Satellite Cultured Cells	--
5	chr8:91545800-91549600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr8:91545800-91550000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr8:91545800-91550000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr8:91545800-91550000	Enhancers	Placenta Amnion	Placenta Amnion
9	chr8:91545800-91550000	Enhancers	HMEC	breast
10	chr8:91546600-91548800	Weak transcription	NHLF	lung
11	chr8:91546800-91548600	Weak transcription	NHDF-Ad	bronchial
12	chr8:91546800-91552800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr8:91547000-91548000	Weak transcription	HUVEC	blood vessel
14	chr8:91547000-91548200	Weak transcription	Osteobl	bone
15	chr8:91547000-91552600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr8:91547000-91557400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr8:91547200-91547600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr8:91547200-91548200	Weak transcription	NH-A	brain
19	chr8:91547200-91548600	Weak transcription	Hela-S3	cervix
20	chr8:91547200-91548800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr8:91547400-91548800	Weak transcription	HSMMtube	muscle

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