Variant report

Variant	rs2105968
Chromosome Location	chr8:91591825-91591826
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:91591227..91594371-chr8:91655666..91659242,4	K562	blood:
2	chr8:91590586..91592373-chr8:91656491..91658902,2	MCF-7	breast:
3	chr8:90994808..90997862-chr8:91591605..91594200,3	K562	blood:
4	chr8:91584429..91589445-chr8:91589711..91593163,5	K562	blood:
5	chr8:91585195..91587294-chr8:91591657..91593163,2	K562	blood:
6	chr8:91589066..91593133-chr8:91594957..91599269,5	MCF-7	breast:
7	chr8:91590970..91593547-chr8:91640454..91643139,2	MCF-7	breast:
8	chr8:91591742..91600378-chr8:91654152..91660927,12	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000104320	Chromatin interaction
ENSG00000246792	Chromatin interaction
ENSG00000180694	Chromatin interaction

Extended variants
information (count: 110 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:110)

rs_ID	r²[population]
rs10086401	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10086462	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10091275	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10103198	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10105142	0.86[EUR][1000 genomes]
rs10111060	0.80[CEU][hapmap];0.83[YRI][hapmap]
rs10112242	0.86[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10283086	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10808619	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10808620	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10956720	0.91[ASN][1000 genomes]
rs10956730	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10956736	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10956748	0.90[ASN][1000 genomes]
rs10956749	0.90[ASN][1000 genomes]
rs10956750	0.81[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs11776824	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11779312	0.85[ASN][1000 genomes]
rs11784529	0.81[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs12545279	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12545351	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12547016	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12548741	0.90[ASN][1000 genomes]
rs12548806	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12680211	0.81[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs13254212	0.93[ASN][1000 genomes]
rs13255452	0.86[CHB][hapmap];0.95[JPT][hapmap];0.93[ASN][1000 genomes]
rs13262354	0.81[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs13267237	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13267989	0.92[ASN][1000 genomes]
rs13268594	0.86[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs13277387	0.81[CHB][hapmap];1.00[JPT][hapmap]
rs13279222	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13279263	0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs1476427	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1476428	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16905041	0.82[CEU][hapmap];0.91[CHB][hapmap];0.80[JPT][hapmap];0.88[ASN][1000 genomes]
rs1858673	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1858674	0.86[CHB][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs2023624	0.85[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2023626	0.81[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs2073640	0.86[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2105965	0.86[CHB][hapmap];0.80[ASN][1000 genomes]
rs2105967	0.89[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs2157607	0.86[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2187981	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2187982	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2205150	0.82[CEU][hapmap];0.84[YRI][hapmap]
rs2213886	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2285232	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2285233	0.91[ASN][1000 genomes]
rs34126139	0.90[ASN][1000 genomes]
rs35409073	0.87[ASN][1000 genomes]
rs36046037	0.91[ASN][1000 genomes]
rs4140679	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4140680	0.86[CEU][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4495386	0.90[ASN][1000 genomes]
rs4495387	0.85[CHB][hapmap];0.89[JPT][hapmap];0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs4734237	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4734250	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4734266	0.90[ASN][1000 genomes]
rs4734268	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4734269	0.81[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs4735210	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4735230	0.90[ASN][1000 genomes]
rs4735236	1.00[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4735256	0.90[ASN][1000 genomes]
rs4735260	0.90[ASN][1000 genomes]
rs4735268	0.80[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs5005585	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62526886	0.90[ASN][1000 genomes]
rs6471113	0.85[CEU][hapmap];0.84[YRI][hapmap];0.84[EUR][1000 genomes]
rs6986001	0.82[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6986088	0.80[ASN][1000 genomes]
rs6986165	0.80[CEU][hapmap]
rs6986359	0.85[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6986689	0.81[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs6988733	0.80[ASN][1000 genomes]
rs6989123	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6998150	0.87[ASN][1000 genomes]
rs6999898	0.82[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];0.95[YRI][hapmap];0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7004287	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7006279	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7007102	0.90[ASN][1000 genomes]
rs7007129	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7008172	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7008765	0.81[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs7012741	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7013893	0.90[ASN][1000 genomes]
rs7014073	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7014967	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7016220	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs715057	0.86[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7463641	0.81[CEU][hapmap];0.90[CHB][hapmap];0.89[JPT][hapmap];0.90[ASN][1000 genomes]
rs756568	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs756569	0.90[ASN][1000 genomes]
rs7812970	0.80[ASN][1000 genomes]
rs7817954	0.80[ASN][1000 genomes]
rs7819519	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7823461	0.86[CHB][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs7826178	0.82[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];0.95[YRI][hapmap];0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7837109	0.86[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7837230	0.90[ASN][1000 genomes]
rs7840846	0.90[ASN][1000 genomes]
rs9297871	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9643298	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9643307	0.90[ASN][1000 genomes]
rs9643308	0.90[ASN][1000 genomes]
rs9693182	0.90[ASN][1000 genomes]
rs9694450	0.90[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91588200-91592600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:91588200-91592600	Weak transcription	HSMM	muscle
3	chr8:91588400-91592200	Weak transcription	HSMMtube	muscle
4	chr8:91590600-91593600	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr8:91590600-91597800	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr8:91590800-91593000	Enhancers	H9 Cell Line	embryonic stem cell
7	chr8:91590800-91593000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr8:91590800-91593200	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr8:91591000-91593000	Enhancers	H1 Cell Line	embryonic stem cell
10	chr8:91591000-91593800	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr8:91591200-91592000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
12	chr8:91591200-91592400	Flanking Active TSS	K562	blood
13	chr8:91591200-91594000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
14	chr8:91591400-91592200	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
15	chr8:91591400-91594400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr8:91591400-91594800	Enhancers	Fetal Heart	heart
17	chr8:91591600-91592200	Enhancers	Fetal Lung	lung
18	chr8:91591600-91592400	Enhancers	NH-A	brain
19	chr8:91591600-91592800	Enhancers	Ovary	ovary
20	chr8:91591600-91592800	Enhancers	HUVEC	blood vessel
21	chr8:91591600-91593600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr8:91591800-91592200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr8:91591800-91593200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr8:91591800-91593800	Enhancers	iPS-18 Cell Line	embryonic stem cell

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