Variant report

Variant	rs4495386
Chromosome Location	chr8:91612232-91612233
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:91610492..91612805-chr8:91614152..91616213,3	K562	blood:

Extended variants
information (count: 104 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:104)

rs_ID	r²[population]
rs10086401	0.87[ASN][1000 genomes]
rs10086462	0.81[ASN][1000 genomes]
rs10091275	0.87[ASN][1000 genomes]
rs10103198	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10112242	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10283086	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10808619	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10808620	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10956720	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10956730	0.90[ASN][1000 genomes]
rs10956736	0.91[ASN][1000 genomes]
rs10956748	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10956749	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10956750	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11776824	0.88[ASN][1000 genomes]
rs11779312	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11784529	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12545279	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12545351	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12545726	0.84[EUR][1000 genomes]
rs12547016	0.87[ASN][1000 genomes]
rs12548741	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12548806	0.87[ASN][1000 genomes]
rs12680211	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13254212	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13255452	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13262354	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13267237	0.82[ASN][1000 genomes]
rs13267989	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13268594	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13279222	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13279263	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1476427	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1476428	0.88[ASN][1000 genomes]
rs16905041	0.84[ASN][1000 genomes]
rs1858673	0.87[ASN][1000 genomes]
rs1858674	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2023624	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2023626	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2073640	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2105965	0.85[EUR][1000 genomes]
rs2105967	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2105968	0.90[ASN][1000 genomes]
rs2157607	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2187981	0.88[ASN][1000 genomes]
rs2187982	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2213886	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2285231	0.86[EUR][1000 genomes]
rs2285232	0.87[ASN][1000 genomes]
rs2285233	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34126139	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35159732	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35409073	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs36046037	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4140679	0.90[ASN][1000 genomes]
rs4140680	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4495387	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4734250	0.90[ASN][1000 genomes]
rs4734266	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4734268	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4734269	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4735210	0.88[ASN][1000 genomes]
rs4735230	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4735236	0.84[ASN][1000 genomes]
rs4735256	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4735260	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4735268	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs5005585	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62526886	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6986001	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6986088	0.85[EUR][1000 genomes]
rs6986359	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6986689	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6988733	0.85[EUR][1000 genomes]
rs6989123	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6998150	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6999898	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7004287	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7006279	0.93[ASN][1000 genomes]
rs7007102	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7007129	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7008765	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7013893	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7014073	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7014967	0.87[ASN][1000 genomes]
rs7016220	0.91[ASN][1000 genomes]
rs715057	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7463641	0.86[ASN][1000 genomes]
rs756568	0.87[ASN][1000 genomes]
rs756569	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7812970	0.85[EUR][1000 genomes]
rs7817954	0.85[EUR][1000 genomes]
rs7819519	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7823461	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7826178	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7837109	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7837230	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7840846	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9297871	0.87[ASN][1000 genomes]
rs9643298	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9643307	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9643308	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9693182	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9694450	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91594600-91621600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:91606600-91621800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:91606600-91627600	Weak transcription	ES-I3 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links