Variant report

Variant	rs10956720
Chromosome Location	chr8:91576222-91576223
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:173987726..173990212-chr8:91575317..91577532,2	MCF-7	breast:
2	chr8:91569707..91572506-chr8:91574364..91576875,2	K562	blood:

Extended variants
information (count: 119 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:119)

rs_ID	r²[population]
rs10086401	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10086462	0.87[ASN][1000 genomes]
rs10091275	0.92[ASN][1000 genomes]
rs10103198	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10105142	0.85[EUR][1000 genomes]
rs10112242	0.92[CEU][hapmap];0.82[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs10283086	0.87[ASN][1000 genomes]
rs10504894	0.87[CEU][hapmap];0.85[EUR][1000 genomes]
rs10808619	0.87[ASN][1000 genomes]
rs10808620	0.87[ASN][1000 genomes]
rs10956730	0.86[CHB][hapmap];0.95[JPT][hapmap];0.91[ASN][1000 genomes]
rs10956736	0.89[ASN][1000 genomes]
rs10956748	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10956749	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10956750	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11776824	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11779312	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11784529	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12545279	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12545351	0.87[ASN][1000 genomes]
rs12545726	0.90[EUR][1000 genomes]
rs12547016	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12548741	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12548806	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12678527	0.87[CEU][hapmap];0.86[EUR][1000 genomes]
rs12680211	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.83[MEX][hapmap];0.88[TSI][hapmap];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13254212	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13255452	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13262354	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.88[TSI][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13266461	0.83[CEU][hapmap]
rs13267237	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13267989	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13268594	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13277387	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.83[MEX][hapmap];0.84[TSI][hapmap]
rs13279263	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1476427	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1476428	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16905041	0.88[CEU][hapmap];0.95[CHB][hapmap];0.81[ASN][1000 genomes]
rs1858673	0.92[ASN][1000 genomes]
rs1858674	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2023624	0.96[CEU][hapmap];0.82[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs2023626	1.00[CEU][hapmap];0.95[CHB][hapmap];0.89[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.84[TSI][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2073640	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.88[MKK][hapmap];0.91[TSI][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2105965	1.00[CEU][hapmap];0.81[CHB][hapmap];0.82[JPT][hapmap];0.93[YRI][hapmap];0.90[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs2105967	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2105968	0.86[CHB][hapmap];0.95[JPT][hapmap];0.91[ASN][1000 genomes]
rs2157607	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2187981	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2187982	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2205151	0.83[CEU][hapmap];0.83[GIH][hapmap];0.81[TSI][hapmap]
rs2205152	0.87[CEU][hapmap];0.83[GIH][hapmap];0.81[TSI][hapmap]
rs2213886	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2285231	0.92[EUR][1000 genomes]
rs2285232	0.92[ASN][1000 genomes]
rs2285233	0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34126139	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35159732	0.88[EUR][1000 genomes]
rs35409073	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs36046037	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3950221	0.83[CEU][hapmap]
rs4140679	0.89[CHD][hapmap];0.95[JPT][hapmap];0.87[TSI][hapmap];0.90[ASN][1000 genomes]
rs4140680	0.80[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4495386	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4495387	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[JPT][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4734237	0.84[EUR][1000 genomes]
rs4734250	0.86[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap];0.91[ASN][1000 genomes]
rs4734266	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4734268	0.87[ASN][1000 genomes]
rs4734269	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4735201	0.87[CEU][hapmap];0.83[GIH][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes]
rs4735210	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4735230	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4735236	0.80[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.87[ASN][1000 genomes]
rs4735256	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4735260	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4735268	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4735295	0.84[CEU][hapmap]
rs5005585	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62526886	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6986001	0.96[CEU][hapmap];0.86[CHB][hapmap];0.85[JPT][hapmap];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6986088	0.93[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs6986359	0.92[CEU][hapmap];0.82[CHB][hapmap];0.89[CHD][hapmap];0.95[JPT][hapmap];0.80[MEX][hapmap];0.87[ASN][1000 genomes]
rs6986689	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6988733	0.91[EUR][1000 genomes]
rs6989123	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6993715	0.86[EUR][1000 genomes]
rs6998150	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6999898	0.96[CEU][hapmap];0.86[CHB][hapmap];0.85[JPT][hapmap];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7000724	0.82[EUR][1000 genomes]
rs7004287	0.87[ASN][1000 genomes]
rs7006279	0.89[ASN][1000 genomes]
rs7007102	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7007129	0.87[ASN][1000 genomes]
rs7008765	0.96[CEU][hapmap];0.95[CHB][hapmap];0.89[CHD][hapmap];0.88[GIH][hapmap];0.95[JPT][hapmap];0.86[TSI][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7013893	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7014073	0.86[ASN][1000 genomes]
rs7014967	0.92[ASN][1000 genomes]
rs7016220	0.82[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs7017295	0.82[TSI][hapmap]
rs715057	0.92[CEU][hapmap];0.82[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs7463641	0.83[CEU][hapmap];0.86[CHB][hapmap];0.83[JPT][hapmap];0.83[ASN][1000 genomes]
rs756568	0.92[ASN][1000 genomes]
rs756569	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7812970	0.92[EUR][1000 genomes]
rs7817954	0.92[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs7819519	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7823461	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7824376	0.87[CEU][hapmap];0.86[EUR][1000 genomes]
rs7824511	0.87[CEU][hapmap];0.86[EUR][1000 genomes]
rs7826178	0.96[CEU][hapmap];0.86[CHB][hapmap];0.85[JPT][hapmap];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7837109	0.92[CEU][hapmap];0.82[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs7837230	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7840846	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9297871	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9643298	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9643307	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9643308	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9693182	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9694450	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91571000-91584600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:91573800-91581000	Weak transcription	Hela-S3	cervix
3	chr8:91575000-91576800	Enhancers	NHEK	skin
4	chr8:91575000-91578200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr8:91575800-91576800	Enhancers	HMEC	breast
6	chr8:91576000-91577000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr8:91576000-91577200	Enhancers	HUVEC	blood vessel
8	chr8:91576200-91576800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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