Variant report

Variant	rs7824376
Chromosome Location	chr8:91521498-91521499
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:91519468..91522365-chr8:91655850..91658412,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000180694	Chromatin interaction

Extended variants
information (count: 88 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:88)

rs_ID	r²[population]
rs10086488	0.82[EUR][1000 genomes]
rs10094978	0.82[EUR][1000 genomes]
rs10105142	0.86[EUR][1000 genomes]
rs10111060	0.86[JPT][hapmap];0.81[EUR][1000 genomes]
rs10112242	0.81[CEU][hapmap]
rs1028255	0.92[CEU][hapmap];0.87[JPT][hapmap];0.87[EUR][1000 genomes]
rs10504894	1.00[CEU][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.99[EUR][1000 genomes]
rs10956720	0.86[EUR][1000 genomes]
rs10956750	0.84[CEU][hapmap]
rs11776824	0.85[EUR][1000 genomes]
rs11784529	0.84[CEU][hapmap]
rs12545726	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12674903	0.89[EUR][1000 genomes]
rs12678527	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12680211	0.83[CEU][hapmap]
rs13254212	0.86[EUR][1000 genomes]
rs13255452	0.83[CEU][hapmap];0.86[EUR][1000 genomes]
rs13262354	0.87[CEU][hapmap]
rs13267989	0.86[EUR][1000 genomes]
rs13268594	0.81[CEU][hapmap];0.81[EUR][1000 genomes]
rs13268721	0.90[EUR][1000 genomes]
rs13277387	0.87[CEU][hapmap]
rs1476427	0.92[EUR][1000 genomes]
rs1476428	0.85[EUR][1000 genomes]
rs1858674	0.84[CEU][hapmap];0.85[EUR][1000 genomes]
rs2023624	0.84[CEU][hapmap]
rs2023626	0.87[CEU][hapmap]
rs2073640	0.87[CEU][hapmap];0.81[EUR][1000 genomes]
rs2105965	0.88[CEU][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2105967	0.87[CEU][hapmap];0.82[EUR][1000 genomes]
rs2157607	0.81[CEU][hapmap];0.81[EUR][1000 genomes]
rs2187981	0.85[EUR][1000 genomes]
rs2187982	0.92[EUR][1000 genomes]
rs2205150	0.87[JPT][hapmap];0.81[EUR][1000 genomes]
rs2205151	0.96[CEU][hapmap];0.91[JPT][hapmap];0.94[YRI][hapmap];0.90[EUR][1000 genomes]
rs2205152	0.95[CEU][hapmap];0.91[JPT][hapmap];0.90[EUR][1000 genomes]
rs2213886	0.92[EUR][1000 genomes]
rs2223010	0.92[CEU][hapmap];0.87[JPT][hapmap];0.86[EUR][1000 genomes]
rs2285231	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2285233	0.81[EUR][1000 genomes]
rs2879361	0.87[EUR][1000 genomes]
rs34126139	0.86[EUR][1000 genomes]
rs35159732	0.83[EUR][1000 genomes]
rs35361206	0.91[EUR][1000 genomes]
rs35816262	0.84[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs36046037	0.80[EUR][1000 genomes]
rs3950221	0.96[CEU][hapmap];0.87[JPT][hapmap];0.95[YRI][hapmap];0.90[EUR][1000 genomes]
rs4495387	0.88[CEU][hapmap]
rs4734237	0.86[EUR][1000 genomes]
rs4734269	0.84[CEU][hapmap]
rs4735190	0.84[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs4735201	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4735210	0.85[EUR][1000 genomes]
rs4735230	0.86[EUR][1000 genomes]
rs56784954	0.92[EUR][1000 genomes]
rs6471085	0.85[EUR][1000 genomes]
rs6471113	0.82[CEU][hapmap];0.96[JPT][hapmap];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6986001	0.84[CEU][hapmap];0.81[EUR][1000 genomes]
rs6986088	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6986165	0.82[JPT][hapmap]
rs6986689	0.84[CEU][hapmap];0.80[EUR][1000 genomes]
rs6988302	0.92[CEU][hapmap];0.82[JPT][hapmap];0.87[EUR][1000 genomes]
rs6988733	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6989123	0.92[EUR][1000 genomes]
rs6992512	0.80[EUR][1000 genomes]
rs6993715	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6995399	0.87[EUR][1000 genomes]
rs6998106	0.81[EUR][1000 genomes]
rs6999898	0.84[CEU][hapmap]
rs7000724	0.96[EUR][1000 genomes]
rs7002775	0.92[CEU][hapmap];0.82[JPT][hapmap];0.84[EUR][1000 genomes]
rs7008765	0.83[CEU][hapmap]
rs7013893	0.86[EUR][1000 genomes]
rs7017295	0.92[CEU][hapmap];0.86[JPT][hapmap];0.87[EUR][1000 genomes]
rs7017630	0.87[EUR][1000 genomes]
rs715057	0.81[CEU][hapmap]
rs7812970	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7817954	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7823461	0.84[CEU][hapmap];0.86[EUR][1000 genomes]
rs7824511	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7826178	0.84[CEU][hapmap];0.81[EUR][1000 genomes]
rs7837109	0.81[CEU][hapmap]
rs7837230	0.86[EUR][1000 genomes]
rs7840846	0.86[EUR][1000 genomes]
rs9297857	0.92[CEU][hapmap];0.82[JPT][hapmap];0.85[EUR][1000 genomes]
rs9642910	0.92[CEU][hapmap];0.82[JPT][hapmap];0.84[EUR][1000 genomes]
rs9643295	0.81[EUR][1000 genomes]
rs9643298	0.92[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91517000-91522400	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr8:91517600-91522400	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr8:91520600-91522400	Enhancers	HUVEC	blood vessel
4	chr8:91520800-91522000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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