Variant report

Variant	rs6471113
Chromosome Location	chr8:91519735-91519736
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:91519468..91522365-chr8:91655850..91658412,2	MCF-7	breast:
2	chr8:91518396..91520484-chr8:91527927..91530886,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000180694	Chromatin interaction

Extended variants
information (count: 86 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:86)

rs_ID	r²[population]
rs10086401	0.89[EUR][1000 genomes]
rs10086462	0.83[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs10086488	0.93[EUR][1000 genomes]
rs10091275	0.82[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs10094978	0.93[EUR][1000 genomes]
rs10103198	0.82[EUR][1000 genomes]
rs10105142	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10111060	0.96[CEU][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs1015994	0.88[EUR][1000 genomes]
rs1028255	0.81[CEU][hapmap];0.91[JPT][hapmap];0.85[EUR][1000 genomes]
rs1033347	0.87[EUR][1000 genomes]
rs1033348	0.87[EUR][1000 genomes]
rs10504894	0.82[CEU][hapmap];0.87[JPT][hapmap];0.88[EUR][1000 genomes]
rs10956730	0.85[CEU][hapmap];0.84[YRI][hapmap];0.84[EUR][1000 genomes]
rs10956736	0.84[EUR][1000 genomes]
rs11776824	0.88[EUR][1000 genomes]
rs12545726	0.81[EUR][1000 genomes]
rs12547016	0.89[EUR][1000 genomes]
rs12548806	0.89[EUR][1000 genomes]
rs12678527	0.82[CEU][hapmap];0.96[JPT][hapmap];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12679836	0.88[EUR][1000 genomes]
rs13267237	0.83[EUR][1000 genomes]
rs1476427	0.81[EUR][1000 genomes]
rs1476428	0.88[EUR][1000 genomes]
rs1858673	0.83[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs2023624	0.84[YRI][hapmap]
rs2105965	0.82[EUR][1000 genomes]
rs2105968	0.85[CEU][hapmap];0.84[YRI][hapmap];0.84[EUR][1000 genomes]
rs2142146	0.87[EUR][1000 genomes]
rs2142147	0.89[EUR][1000 genomes]
rs2187981	0.88[EUR][1000 genomes]
rs2187982	0.81[EUR][1000 genomes]
rs2205150	0.96[CEU][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs2205151	0.87[JPT][hapmap];0.80[EUR][1000 genomes]
rs2205152	0.87[JPT][hapmap];0.80[EUR][1000 genomes]
rs2213886	0.81[EUR][1000 genomes]
rs2223010	0.81[CEU][hapmap];0.91[JPT][hapmap];0.84[EUR][1000 genomes]
rs2285231	0.82[EUR][1000 genomes]
rs2285232	0.83[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs2879361	0.85[EUR][1000 genomes]
rs35361206	0.80[EUR][1000 genomes]
rs35816262	0.81[EUR][1000 genomes]
rs3950221	0.83[JPT][hapmap];0.80[EUR][1000 genomes]
rs4140679	0.84[CEU][hapmap];0.86[EUR][1000 genomes]
rs4734237	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4734250	0.84[CEU][hapmap];0.83[YRI][hapmap];0.84[EUR][1000 genomes]
rs4735190	0.81[EUR][1000 genomes]
rs4735201	0.81[CEU][hapmap];0.95[JPT][hapmap];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4735210	0.88[EUR][1000 genomes]
rs4735236	0.85[CEU][hapmap];0.84[YRI][hapmap];0.87[EUR][1000 genomes]
rs5005585	0.82[EUR][1000 genomes]
rs56784954	0.81[EUR][1000 genomes]
rs6471084	0.85[EUR][1000 genomes]
rs6471105	0.89[EUR][1000 genomes]
rs6982329	0.88[EUR][1000 genomes]
rs6986088	0.82[EUR][1000 genomes]
rs6986165	0.96[CEU][hapmap];0.87[JPT][hapmap];0.90[EUR][1000 genomes]
rs6988302	0.81[CEU][hapmap];0.87[JPT][hapmap];0.85[EUR][1000 genomes]
rs6988733	0.82[EUR][1000 genomes]
rs6989123	0.81[EUR][1000 genomes]
rs6992512	0.91[EUR][1000 genomes]
rs6993715	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6995399	0.85[EUR][1000 genomes]
rs6998106	0.91[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs7000724	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7002775	0.80[CEU][hapmap];0.87[JPT][hapmap];0.82[EUR][1000 genomes]
rs7006279	0.83[EUR][1000 genomes]
rs7008172	0.86[EUR][1000 genomes]
rs7012741	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7014967	0.81[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs7016220	0.82[CEU][hapmap];0.84[YRI][hapmap];0.83[EUR][1000 genomes]
rs7017295	0.80[CEU][hapmap];0.91[JPT][hapmap];0.85[EUR][1000 genomes]
rs7017630	0.85[EUR][1000 genomes]
rs756568	0.83[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs7812970	0.82[EUR][1000 genomes]
rs7817954	0.82[EUR][1000 genomes]
rs7819519	0.82[EUR][1000 genomes]
rs7821069	0.88[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs7824376	0.82[CEU][hapmap];0.96[JPT][hapmap];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7824511	0.82[CEU][hapmap];0.96[JPT][hapmap];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7824956	0.86[EUR][1000 genomes]
rs9297857	0.81[CEU][hapmap];0.86[JPT][hapmap];0.83[EUR][1000 genomes]
rs9297871	0.89[EUR][1000 genomes]
rs9642910	0.80[CEU][hapmap];0.87[JPT][hapmap];0.82[EUR][1000 genomes]
rs9643295	0.92[EUR][1000 genomes]
rs9643298	0.81[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91517000-91522400	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr8:91517600-91522400	Weak transcription	Muscle Satellite Cultured Cells	--

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