Variant report

Variant	rs10094978
Chromosome Location	chr8:91509054-91509055
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:91506491..91513264-chr8:91513360..91516300,7	K562	blood:

Extended variants
information (count: 68 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:68)

rs_ID	r²[population]
rs10086401	0.82[EUR][1000 genomes]
rs10086462	0.83[EUR][1000 genomes]
rs10086488	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10091275	0.83[EUR][1000 genomes]
rs10105142	0.82[EUR][1000 genomes]
rs10111060	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1015994	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1028255	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1033347	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1033348	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10504894	0.96[JPT][hapmap];0.81[EUR][1000 genomes]
rs10956730	0.82[CEU][hapmap]
rs11776824	0.81[EUR][1000 genomes]
rs12547016	0.82[EUR][1000 genomes]
rs12548806	0.82[EUR][1000 genomes]
rs12674903	0.85[EUR][1000 genomes]
rs12678527	0.87[JPT][hapmap];0.82[EUR][1000 genomes]
rs12679836	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13268721	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1476428	0.81[EUR][1000 genomes]
rs1858673	0.83[EUR][1000 genomes]
rs2105968	0.82[CEU][hapmap]
rs2142146	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2142147	0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2187981	0.81[EUR][1000 genomes]
rs2205150	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2205151	0.81[CEU][hapmap];0.95[JPT][hapmap];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2205152	0.80[CEU][hapmap];0.95[JPT][hapmap];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2223010	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2285232	0.83[EUR][1000 genomes]
rs2879361	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35816262	0.87[EUR][1000 genomes]
rs3950221	0.82[CEU][hapmap];0.91[JPT][hapmap];0.86[EUR][1000 genomes]
rs4140679	0.80[CEU][hapmap]
rs4734250	0.80[CEU][hapmap]
rs4735190	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4735201	0.86[JPT][hapmap];0.80[EUR][1000 genomes]
rs4735210	0.81[EUR][1000 genomes]
rs4735236	0.81[CEU][hapmap];0.80[EUR][1000 genomes]
rs56784954	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6471082	0.83[EUR][1000 genomes]
rs6471083	0.83[EUR][1000 genomes]
rs6471084	0.85[AFR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6471085	0.81[EUR][1000 genomes]
rs6471105	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6471113	0.96[CEU][hapmap];0.91[JPT][hapmap];0.93[EUR][1000 genomes]
rs6982329	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6986165	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.95[YRI][hapmap];0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6988302	0.85[CEU][hapmap];0.91[CHB][hapmap];0.96[JPT][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6992512	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6993715	0.81[EUR][1000 genomes]
rs6995399	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6998106	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7000724	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7002775	0.84[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.81[YRI][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7012741	0.82[EUR][1000 genomes]
rs7014967	0.83[EUR][1000 genomes]
rs7017295	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7017630	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs756568	0.83[EUR][1000 genomes]
rs7821069	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7824376	0.87[JPT][hapmap];0.82[EUR][1000 genomes]
rs7824511	0.87[JPT][hapmap];0.82[EUR][1000 genomes]
rs7824956	0.91[EUR][1000 genomes]
rs9297857	0.85[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9297871	0.82[EUR][1000 genomes]
rs9642910	0.84[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9643295	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91508800-91509400	Enhancers	Placenta Amnion	Placenta Amnion
2	chr8:91508800-91510000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:91509000-91509600	Enhancers	HMEC	breast

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