Variant report

Variant	rs10086401
Chromosome Location	chr8:91572818-91572819
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:91572355..91575164-chr8:91578134..91580183,2	MCF-7	breast:
2	chr8:91541551..91544339-chr8:91572662..91575191,2	MCF-7	breast:
3	chr8:91563492..91566164-chr8:91571290..91573705,2	K562	blood:
4	chr8:91562313..91566164-chr8:91571290..91573705,3	K562	blood:

Extended variants
information (count: 115 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:115)

rs_ID	r²[population]
rs10086462	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10086488	0.83[EUR][1000 genomes]
rs10091275	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10094978	0.82[EUR][1000 genomes]
rs10103198	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10105142	0.91[EUR][1000 genomes]
rs10111060	0.82[EUR][1000 genomes]
rs10112242	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10283086	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10808619	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10808620	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10956720	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10956730	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10956736	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10956748	0.87[ASN][1000 genomes]
rs10956749	0.87[ASN][1000 genomes]
rs10956750	0.87[ASN][1000 genomes]
rs11776824	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11779312	0.81[ASN][1000 genomes]
rs11784529	0.86[ASN][1000 genomes]
rs12545279	0.87[ASN][1000 genomes]
rs12545351	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12545726	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12547016	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12548741	0.87[ASN][1000 genomes]
rs12548806	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12680211	0.87[ASN][1000 genomes]
rs13254212	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13255452	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13262354	0.85[ASN][1000 genomes]
rs13267237	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13267989	0.80[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13268594	0.90[ASN][1000 genomes]
rs13279263	0.83[ASN][1000 genomes]
rs1476427	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1476428	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16905041	0.84[ASN][1000 genomes]
rs1858673	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1858674	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2023624	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2023626	0.87[ASN][1000 genomes]
rs2073640	0.90[ASN][1000 genomes]
rs2105965	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2105967	0.90[ASN][1000 genomes]
rs2105968	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2157607	0.88[ASN][1000 genomes]
rs2187981	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2187982	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2205150	0.82[EUR][1000 genomes]
rs2213886	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2285231	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2285232	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2285233	0.87[ASN][1000 genomes]
rs34126139	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35409073	0.83[ASN][1000 genomes]
rs36046037	0.87[ASN][1000 genomes]
rs4140679	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4140680	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4495386	0.87[ASN][1000 genomes]
rs4495387	0.81[ASN][1000 genomes]
rs4734237	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4734250	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4734266	0.87[ASN][1000 genomes]
rs4734268	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4734269	0.87[ASN][1000 genomes]
rs4735210	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4735230	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4735236	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4735256	0.86[ASN][1000 genomes]
rs4735260	0.87[ASN][1000 genomes]
rs4735268	0.87[ASN][1000 genomes]
rs5005585	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62526886	0.87[ASN][1000 genomes]
rs6471113	0.89[EUR][1000 genomes]
rs6986001	0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6986088	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6986359	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6986689	0.87[ASN][1000 genomes]
rs6988733	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6989123	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6992512	0.81[EUR][1000 genomes]
rs6998106	0.82[EUR][1000 genomes]
rs6998150	0.83[ASN][1000 genomes]
rs6999898	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs7000724	0.82[EUR][1000 genomes]
rs7004287	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7006279	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7007102	0.87[ASN][1000 genomes]
rs7007129	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7008172	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7008765	0.87[ASN][1000 genomes]
rs7012741	0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7013893	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7014073	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7014967	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7016220	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs715057	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7463641	0.86[ASN][1000 genomes]
rs756568	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs756569	0.86[ASN][1000 genomes]
rs7812970	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7817954	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7819519	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7823461	0.80[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7826178	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs7837109	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7837230	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7840846	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9297871	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9643295	0.82[EUR][1000 genomes]
rs9643298	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9643307	0.87[ASN][1000 genomes]
rs9643308	0.87[ASN][1000 genomes]
rs9693182	0.87[ASN][1000 genomes]
rs9694450	0.87[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91571000-91584600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:91572400-91573000	Enhancers	Liver	Liver

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