Variant report

Variant	rs62367805
Chromosome Location	chr5:57843083-57843084
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CTD-2117L12.1.1-2	chr5:57842962-57843198	NR_109904

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10035587	0.84[EUR][1000 genomes]
rs10056043	0.84[EUR][1000 genomes]
rs10071540	0.84[EUR][1000 genomes]
rs10071783	0.84[EUR][1000 genomes]
rs10074748	0.84[EUR][1000 genomes]
rs10472062	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11739694	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11741689	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11745321	0.84[EUR][1000 genomes]
rs11746501	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11747268	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11747708	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11948189	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11949041	0.85[ASN][1000 genomes]
rs11949753	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11950095	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11957466	0.85[ASN][1000 genomes]
rs11958256	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12173136	0.84[EUR][1000 genomes]
rs12187683	0.84[EUR][1000 genomes]
rs12188785	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12518781	0.85[ASN][1000 genomes]
rs13159762	0.85[ASN][1000 genomes]
rs13168504	0.85[ASN][1000 genomes]
rs13168895	0.85[ASN][1000 genomes]
rs13174477	0.85[ASN][1000 genomes]
rs15915	0.85[ASN][1000 genomes]
rs1605739	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1605740	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17773396	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4700297	0.85[ASN][1000 genomes]
rs57367646	0.84[EUR][1000 genomes]
rs59598546	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62366360	0.85[ASN][1000 genomes]
rs62366396	0.85[ASN][1000 genomes]
rs62366397	0.85[ASN][1000 genomes]
rs62366400	0.85[ASN][1000 genomes]
rs62366401	0.85[ASN][1000 genomes]
rs62366402	0.85[ASN][1000 genomes]
rs62366403	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62366404	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62366441	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62366446	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62366447	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62366448	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6865094	0.84[EUR][1000 genomes]
rs6869174	0.84[EUR][1000 genomes]
rs6870990	0.85[ASN][1000 genomes]
rs6889999	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6890117	0.84[EUR][1000 genomes]
rs6890154	0.84[EUR][1000 genomes]
rs6890362	0.84[EUR][1000 genomes]
rs6891534	0.84[EUR][1000 genomes]
rs6895777	0.84[EUR][1000 genomes]
rs6895889	0.84[EUR][1000 genomes]
rs73094379	0.83[EUR][1000 genomes]
rs7721366	0.90[EUR][1000 genomes]
rs963615	0.85[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57842800-57845400	Weak transcription	Ovary	ovary

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