Variant report

Variant	rs7148957
Chromosome Location	chr14:55631823-55631824
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 91 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:91)

rs_ID	r²[population]
rs10144869	0.85[ASN][1000 genomes]
rs10483640	0.85[ASN][1000 genomes]
rs10498474	0.98[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11850516	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11851023	0.85[ASN][1000 genomes]
rs11851945	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12323804	0.85[ASN][1000 genomes]
rs13379420	0.82[ASN][1000 genomes]
rs17128230	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17128262	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17128275	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17128277	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17128292	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17128303	0.85[ASN][1000 genomes]
rs17128323	0.85[ASN][1000 genomes]
rs1886784	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1887494	0.93[ASN][1000 genomes]
rs2075598	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2274272	0.98[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28408795	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28436894	0.97[ASN][1000 genomes]
rs28681113	0.97[ASN][1000 genomes]
rs28883964	0.85[ASN][1000 genomes]
rs2985914	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3759666	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4334208	0.82[ASN][1000 genomes]
rs55673612	0.94[ASN][1000 genomes]
rs55772085	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55848305	0.94[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55912862	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56192604	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56358335	0.96[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57064758	0.94[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57196783	0.94[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57612384	0.85[ASN][1000 genomes]
rs57750925	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58737648	0.90[ASN][1000 genomes]
rs59155162	0.85[ASN][1000 genomes]
rs59700273	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs60023093	0.90[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs60204830	0.85[ASN][1000 genomes]
rs60715972	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6573004	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7141563	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7142831	0.88[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs7145502	0.85[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs7147172	0.85[ASN][1000 genomes]
rs7147666	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7148959	0.83[EUR][1000 genomes]
rs7149385	0.97[ASN][1000 genomes]
rs7150083	0.97[ASN][1000 genomes]
rs7152543	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7153322	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7153418	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7153958	0.85[ASN][1000 genomes]
rs7154368	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7155704	0.85[ASN][1000 genomes]
rs7155729	0.85[ASN][1000 genomes]
rs7155936	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7156997	0.97[ASN][1000 genomes]
rs7157000	0.97[ASN][1000 genomes]
rs7157585	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7158989	0.88[ASN][1000 genomes]
rs7159530	0.94[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7160575	0.90[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs7160642	0.85[ASN][1000 genomes]
rs7160753	0.88[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs7161564	0.97[ASN][1000 genomes]
rs72716670	0.97[ASN][1000 genomes]
rs74050920	0.83[EUR][1000 genomes]
rs74050921	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74050928	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74050932	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs74050937	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs74050939	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs74050958	0.85[ASN][1000 genomes]
rs8004899	0.97[ASN][1000 genomes]
rs8005218	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8009009	0.98[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8009060	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8009181	0.97[ASN][1000 genomes]
rs8010751	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8010791	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8010993	0.92[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs8011980	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8012397	0.83[ASN][1000 genomes]
rs8016444	0.85[ASN][1000 genomes]
rs8016716	0.85[ASN][1000 genomes]
rs8017821	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8021832	0.90[ASN][1000 genomes]
rs8022101	0.94[ASN][1000 genomes]

No data

Chromatin state (count:68 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55598600-55656600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr14:55604000-55636400	Strong transcription	Fetal Thymus	thymus
3	chr14:55605200-55656000	Strong transcription	HUES64 Cell Line	embryonic stem cell
4	chr14:55605400-55657000	Weak transcription	Fetal Kidney	kidney
5	chr14:55606600-55656000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr14:55607000-55656000	Strong transcription	HUES48 Cell Line	embryonic stem cell
7	chr14:55607200-55652200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
8	chr14:55607600-55651800	Strong transcription	H1 Cell Line	embryonic stem cell
9	chr14:55607600-55655200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
10	chr14:55610600-55651600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr14:55610600-55655400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr14:55610600-55655600	Strong transcription	Dnd41	blood
13	chr14:55610800-55656000	Strong transcription	HUES6 Cell Line	embryonic stem cell
14	chr14:55611000-55656000	Weak transcription	Fetal Heart	heart
15	chr14:55611200-55643400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr14:55611600-55656600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr14:55612400-55637400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
18	chr14:55613400-55639200	Weak transcription	Fetal Intestine Small	intestine
19	chr14:55613400-55657800	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr14:55614200-55633600	Weak transcription	Rectal Mucosa Donor 31	rectum
21	chr14:55619200-55646800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr14:55619400-55634000	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr14:55619600-55643800	Weak transcription	NHDF-Ad	bronchial
24	chr14:55619800-55647400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr14:55621000-55633200	Weak transcription	Fetal Stomach	stomach
26	chr14:55621400-55643800	Weak transcription	NH-A	brain
27	chr14:55621600-55634400	Weak transcription	K562	blood
28	chr14:55621600-55634600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr14:55621800-55632000	Weak transcription	NHLF	lung
30	chr14:55621800-55646200	Weak transcription	NHEK	skin
31	chr14:55622600-55649000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
32	chr14:55623400-55633200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr14:55623600-55657000	Weak transcription	Fetal Muscle Leg	muscle
34	chr14:55624000-55637800	Weak transcription	Primary hematopoietic stem cells	blood
35	chr14:55624800-55644200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr14:55625000-55638000	Weak transcription	Fetal Intestine Large	intestine
37	chr14:55626600-55633600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
38	chr14:55628600-55633400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr14:55628800-55633000	Strong transcription	HUVEC	blood vessel
40	chr14:55629000-55635600	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
41	chr14:55629000-55650400	Strong transcription	Primary neutrophils fromperipheralblood	blood
42	chr14:55629200-55635400	Strong transcription	Cortex derived primary cultured neurospheres	brain
43	chr14:55629200-55639000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr14:55629200-55655600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr14:55629400-55633800	Strong transcription	HepG2	liver
46	chr14:55629400-55650600	Strong transcription	Primary monocytes fromperipheralblood	blood
47	chr14:55629400-55652000	Strong transcription	Monocytes-CD14+_RO01746	blood
48	chr14:55630000-55633400	Strong transcription	GM12878-XiMat	blood
49	chr14:55630000-55635800	Strong transcription	A549	lung
50	chr14:55630200-55632400	Strong transcription	H9 Cell Line	embryonic stem cell

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