Variant report

Variant	rs8016444
Chromosome Location	chr14:55711690-55711691
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:55706022..55708410-chr14:55710949..55713300,2	K562	blood:
2	chr14:55709704..55712679-chr14:55737747..55740445,2	K562	blood:
3	chr14:55709259..55712260-chr14:55714004..55717778,3	K562	blood:
4	chr14:55706701..55708410-chr14:55710949..55712624,2	K562	blood:
5	chr14:55710760..55712909-chr14:55714004..55716438,2	K562	blood:

Variant related genes	Relation type
ENSG00000258413	Chromatin interaction
ENSG00000178974	Chromatin interaction
ENSG00000271180	Chromatin interaction

Extended variants
information (count: 117 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:117)

rs_ID	r²[population]
rs10130894	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10134937	0.86[EUR][1000 genomes]
rs10135891	0.86[EUR][1000 genomes]
rs10139912	0.94[ASN][1000 genomes]
rs10144869	1.00[CHB][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10146943	0.85[AMR][1000 genomes]
rs10149926	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10162552	0.86[EUR][1000 genomes]
rs10483640	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10498474	0.85[ASN][1000 genomes]
rs11844441	0.86[EUR][1000 genomes]
rs11845802	0.83[EUR][1000 genomes]
rs11850516	0.85[ASN][1000 genomes]
rs11851023	1.00[CHB][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11851945	0.88[ASN][1000 genomes]
rs12323804	1.00[ASN][1000 genomes]
rs13379398	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs13379420	1.00[CHB][hapmap];0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17128230	0.85[ASN][1000 genomes]
rs17128262	0.85[ASN][1000 genomes]
rs17128275	0.88[ASN][1000 genomes]
rs17128277	0.88[ASN][1000 genomes]
rs17128292	0.88[ASN][1000 genomes]
rs17128303	1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17128323	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17128370	0.84[AMR][1000 genomes]
rs17128434	0.86[EUR][1000 genomes]
rs1886784	0.85[ASN][1000 genomes]
rs1887494	0.85[ASN][1000 genomes]
rs1952086	0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2050669	0.86[EUR][1000 genomes]
rs2065998	0.86[EUR][1000 genomes]
rs2075598	0.85[ASN][1000 genomes]
rs2274272	0.85[ASN][1000 genomes]
rs2341536	0.86[EUR][1000 genomes]
rs28379450	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs28408795	0.88[ASN][1000 genomes]
rs28436894	0.82[ASN][1000 genomes]
rs28661252	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs28681113	0.82[ASN][1000 genomes]
rs28883964	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2985914	0.97[ASN][1000 genomes]
rs3759666	0.85[ASN][1000 genomes]
rs4334208	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs55772085	0.85[ASN][1000 genomes]
rs55848305	0.85[ASN][1000 genomes]
rs55912862	0.94[ASN][1000 genomes]
rs56102648	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs56192604	0.88[ASN][1000 genomes]
rs56358335	0.85[ASN][1000 genomes]
rs57064758	0.85[ASN][1000 genomes]
rs57196783	0.85[ASN][1000 genomes]
rs57612384	1.00[ASN][1000 genomes]
rs57750925	0.85[ASN][1000 genomes]
rs58737648	0.82[ASN][1000 genomes]
rs59155162	1.00[ASN][1000 genomes]
rs59700273	0.82[ASN][1000 genomes]
rs60023093	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60204830	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60549793	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs60715972	1.00[ASN][1000 genomes]
rs61662514	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6573004	0.85[ASN][1000 genomes]
rs7141563	0.88[ASN][1000 genomes]
rs7141706	1.00[CHB][hapmap];0.94[ASN][1000 genomes]
rs7142831	1.00[CHB][hapmap];0.80[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7145502	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7147172	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7147666	0.88[ASN][1000 genomes]
rs7148663	0.85[AMR][1000 genomes]
rs7148957	0.85[ASN][1000 genomes]
rs7148959	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7149385	0.82[ASN][1000 genomes]
rs7150083	0.82[ASN][1000 genomes]
rs7152543	0.82[ASN][1000 genomes]
rs7153322	0.82[ASN][1000 genomes]
rs7153418	1.00[ASN][1000 genomes]
rs7153651	1.00[CHB][hapmap]
rs7153958	1.00[ASN][1000 genomes]
rs7154368	0.88[ASN][1000 genomes]
rs7155704	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7155729	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7155936	0.88[ASN][1000 genomes]
rs7156997	0.82[ASN][1000 genomes]
rs7157000	0.82[ASN][1000 genomes]
rs7157585	0.88[ASN][1000 genomes]
rs7159530	0.85[ASN][1000 genomes]
rs7160411	1.00[CHB][hapmap];0.94[ASN][1000 genomes]
rs7160575	1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7160642	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7160753	0.80[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7161564	0.82[ASN][1000 genomes]
rs72716670	0.82[ASN][1000 genomes]
rs74050920	0.83[EUR][1000 genomes]
rs74050921	0.85[ASN][1000 genomes]
rs74050928	0.85[ASN][1000 genomes]
rs74050932	0.88[ASN][1000 genomes]
rs74050937	0.85[ASN][1000 genomes]
rs74050939	1.00[ASN][1000 genomes]
rs74050958	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74050963	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs74050975	0.86[EUR][1000 genomes]
rs74053904	0.86[EUR][1000 genomes]
rs8004899	0.82[ASN][1000 genomes]
rs8005218	0.82[ASN][1000 genomes]
rs8007038	0.86[EUR][1000 genomes]
rs8009060	0.88[ASN][1000 genomes]
rs8009181	0.82[ASN][1000 genomes]
rs8010751	0.88[ASN][1000 genomes]
rs8010791	0.88[ASN][1000 genomes]
rs8010993	0.82[ASN][1000 genomes]
rs8011980	0.85[ASN][1000 genomes]
rs8016716	1.00[CHB][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8017821	1.00[ASN][1000 genomes]
rs8021377	0.86[EUR][1000 genomes]
rs946058	0.86[EUR][1000 genomes]
rs9652341	0.86[EUR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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