Variant report

Variant	rs7147172
Chromosome Location	chr14:55700997-55700998
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:55679230..55681659-chr14:55700930..55702648,2	MCF-7	breast:

Extended variants
information (count: 119 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:119)

rs_ID	r²[population]
rs10130894	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10134937	0.87[EUR][1000 genomes]
rs10135891	1.00[GIH][hapmap];1.00[MEX][hapmap];0.87[EUR][1000 genomes]
rs10139912	0.94[ASN][1000 genomes]
rs10144869	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10146943	0.96[AMR][1000 genomes]
rs10149926	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10162552	0.87[EUR][1000 genomes]
rs10220441	1.00[MEX][hapmap]
rs10483640	1.00[ASN][1000 genomes]
rs10498474	0.85[ASN][1000 genomes]
rs11844441	0.87[EUR][1000 genomes]
rs11850516	0.85[ASN][1000 genomes]
rs11851023	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11851945	0.88[ASN][1000 genomes]
rs12323804	0.84[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13379398	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13379420	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17128159	0.81[GIH][hapmap]
rs17128230	0.85[ASN][1000 genomes]
rs17128262	0.88[CHD][hapmap];1.00[GIH][hapmap];0.86[MEX][hapmap];0.85[ASN][1000 genomes]
rs17128275	0.88[ASN][1000 genomes]
rs17128277	0.88[ASN][1000 genomes]
rs17128292	0.88[ASN][1000 genomes]
rs17128303	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17128323	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17128370	1.00[GIH][hapmap];0.82[AMR][1000 genomes]
rs17128434	0.87[EUR][1000 genomes]
rs17128438	1.00[MEX][hapmap]
rs1886784	0.88[CHD][hapmap];1.00[GIH][hapmap];0.86[MEX][hapmap];0.85[ASN][1000 genomes]
rs1887494	0.85[ASN][1000 genomes]
rs1952086	0.94[ASN][1000 genomes]
rs2050669	0.87[EUR][1000 genomes]
rs2065998	0.87[EUR][1000 genomes]
rs2075598	0.88[CHD][hapmap];1.00[GIH][hapmap];0.85[ASN][1000 genomes]
rs2274272	0.85[ASN][1000 genomes]
rs2341536	0.87[EUR][1000 genomes]
rs28379450	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs28408795	0.88[ASN][1000 genomes]
rs28436894	0.82[ASN][1000 genomes]
rs28661252	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs28681113	0.82[ASN][1000 genomes]
rs28787988	0.82[AMR][1000 genomes]
rs28883964	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2985914	0.97[ASN][1000 genomes]
rs3759666	0.88[CHD][hapmap];1.00[GIH][hapmap];0.86[MEX][hapmap];0.85[ASN][1000 genomes]
rs4334208	0.89[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs55772085	0.85[ASN][1000 genomes]
rs55848305	0.85[ASN][1000 genomes]
rs55912862	0.94[ASN][1000 genomes]
rs56192604	0.88[ASN][1000 genomes]
rs56358335	0.85[ASN][1000 genomes]
rs57064758	0.85[ASN][1000 genomes]
rs57196783	0.85[ASN][1000 genomes]
rs57612384	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57750925	0.85[ASN][1000 genomes]
rs58737648	0.82[ASN][1000 genomes]
rs59155162	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59700273	0.82[ASN][1000 genomes]
rs60023093	0.97[ASN][1000 genomes]
rs60204830	1.00[ASN][1000 genomes]
rs60549793	0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs60715972	1.00[ASN][1000 genomes]
rs61662514	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6573004	0.85[ASN][1000 genomes]
rs7141563	0.88[ASN][1000 genomes]
rs7141706	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.84[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs7142831	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7145502	1.00[ASN][1000 genomes]
rs7147666	0.88[ASN][1000 genomes]
rs7148663	0.96[AMR][1000 genomes]
rs7148957	0.85[ASN][1000 genomes]
rs7149385	0.82[ASN][1000 genomes]
rs7150083	0.82[ASN][1000 genomes]
rs7152543	0.82[ASN][1000 genomes]
rs7153322	0.82[ASN][1000 genomes]
rs7153418	1.00[ASN][1000 genomes]
rs7153651	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7153958	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7154368	0.88[ASN][1000 genomes]
rs7155704	1.00[ASN][1000 genomes]
rs7155729	1.00[ASN][1000 genomes]
rs7155936	0.88[ASN][1000 genomes]
rs7156997	0.82[ASN][1000 genomes]
rs7157000	0.82[ASN][1000 genomes]
rs7157585	0.88[ASN][1000 genomes]
rs7159530	0.85[ASN][1000 genomes]
rs7160411	0.81[ASW][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.90[MKK][hapmap];0.88[YRI][hapmap];0.82[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs7160575	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7160642	1.00[ASN][1000 genomes]
rs7160753	1.00[ASN][1000 genomes]
rs7161564	0.82[ASN][1000 genomes]
rs72716670	0.82[ASN][1000 genomes]
rs74050921	0.85[ASN][1000 genomes]
rs74050928	0.85[ASN][1000 genomes]
rs74050932	0.88[ASN][1000 genomes]
rs74050937	0.85[ASN][1000 genomes]
rs74050939	1.00[ASN][1000 genomes]
rs74050958	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs74050963	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs74050968	0.83[AMR][1000 genomes]
rs74050975	0.87[EUR][1000 genomes]
rs74053904	0.87[EUR][1000 genomes]
rs8004899	0.82[ASN][1000 genomes]
rs8005218	0.82[ASN][1000 genomes]
rs8007038	0.87[EUR][1000 genomes]
rs8009060	0.88[ASN][1000 genomes]
rs8009181	0.82[CHD][hapmap];0.88[MEX][hapmap];0.82[ASN][1000 genomes]
rs8010751	0.88[ASN][1000 genomes]
rs8010791	0.88[ASN][1000 genomes]
rs8010993	0.82[ASN][1000 genomes]
rs8011980	0.85[ASN][1000 genomes]
rs8012397	0.82[CHD][hapmap]
rs8016444	1.00[CHB][hapmap];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs8016716	1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs8017821	1.00[ASN][1000 genomes]
rs8021377	0.87[EUR][1000 genomes]
rs946058	0.87[EUR][1000 genomes]
rs9652341	0.87[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55700000-55701200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr14:55700200-55701000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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