Variant report

Variant	rs12323804
Chromosome Location	chr14:55684729-55684730
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 91 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:91)

rs_ID	r²[population]
rs10139912	0.94[ASN][1000 genomes]
rs10144869	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10483640	1.00[ASN][1000 genomes]
rs10498474	0.85[ASN][1000 genomes]
rs11850516	0.85[ASN][1000 genomes]
rs11851023	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11851945	0.88[ASN][1000 genomes]
rs13379420	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs17128230	0.85[ASN][1000 genomes]
rs17128262	0.85[ASN][1000 genomes]
rs17128275	0.88[ASN][1000 genomes]
rs17128277	0.88[ASN][1000 genomes]
rs17128292	0.88[ASN][1000 genomes]
rs17128303	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17128323	1.00[ASN][1000 genomes]
rs17128370	0.86[EUR][1000 genomes]
rs1886784	0.85[ASN][1000 genomes]
rs1887494	0.85[ASN][1000 genomes]
rs1952086	0.94[ASN][1000 genomes]
rs2075598	0.85[ASN][1000 genomes]
rs2274272	0.85[ASN][1000 genomes]
rs28408795	0.88[ASN][1000 genomes]
rs28436894	0.82[ASN][1000 genomes]
rs28681113	0.82[ASN][1000 genomes]
rs28883964	1.00[ASN][1000 genomes]
rs2985914	0.97[ASN][1000 genomes]
rs3759666	0.85[ASN][1000 genomes]
rs4334208	0.97[ASN][1000 genomes]
rs55772085	0.85[ASN][1000 genomes]
rs55848305	0.85[ASN][1000 genomes]
rs55912862	0.94[ASN][1000 genomes]
rs56192604	0.88[ASN][1000 genomes]
rs56358335	0.85[ASN][1000 genomes]
rs57064758	0.85[ASN][1000 genomes]
rs57196783	0.85[ASN][1000 genomes]
rs57612384	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57750925	0.85[ASN][1000 genomes]
rs58737648	0.82[ASN][1000 genomes]
rs59155162	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59700273	0.82[ASN][1000 genomes]
rs60023093	0.97[ASN][1000 genomes]
rs60204830	1.00[ASN][1000 genomes]
rs60549793	0.82[ASN][1000 genomes]
rs60715972	1.00[ASN][1000 genomes]
rs6573004	0.85[ASN][1000 genomes]
rs7141563	0.88[ASN][1000 genomes]
rs7141706	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs7142831	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7145502	1.00[ASN][1000 genomes]
rs7147172	0.84[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7147666	0.88[ASN][1000 genomes]
rs7148957	0.85[ASN][1000 genomes]
rs7149385	0.82[ASN][1000 genomes]
rs7150083	0.82[ASN][1000 genomes]
rs7152543	0.82[ASN][1000 genomes]
rs7153322	0.82[ASN][1000 genomes]
rs7153418	1.00[ASN][1000 genomes]
rs7153651	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7153958	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7154368	0.88[ASN][1000 genomes]
rs7155704	1.00[ASN][1000 genomes]
rs7155729	1.00[ASN][1000 genomes]
rs7155936	0.88[ASN][1000 genomes]
rs7156997	0.82[ASN][1000 genomes]
rs7157000	0.82[ASN][1000 genomes]
rs7157585	0.88[ASN][1000 genomes]
rs7159530	0.85[ASN][1000 genomes]
rs7160411	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs7160575	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7160642	1.00[ASN][1000 genomes]
rs7160753	1.00[ASN][1000 genomes]
rs7161564	0.82[ASN][1000 genomes]
rs72716670	0.82[ASN][1000 genomes]
rs74050921	0.85[ASN][1000 genomes]
rs74050928	0.85[ASN][1000 genomes]
rs74050932	0.88[ASN][1000 genomes]
rs74050937	0.85[ASN][1000 genomes]
rs74050939	1.00[ASN][1000 genomes]
rs74050958	1.00[ASN][1000 genomes]
rs74050963	0.91[ASN][1000 genomes]
rs8004899	0.82[ASN][1000 genomes]
rs8005218	0.82[ASN][1000 genomes]
rs8009060	0.88[ASN][1000 genomes]
rs8009181	0.82[ASN][1000 genomes]
rs8010751	0.88[ASN][1000 genomes]
rs8010791	0.88[ASN][1000 genomes]
rs8010993	0.82[ASN][1000 genomes]
rs8011980	0.85[ASN][1000 genomes]
rs8016444	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs8016716	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs8017821	1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55679800-55684800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr14:55679800-55685200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:55679800-55685200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr14:55680200-55685600	Weak transcription	NHEK	skin
5	chr14:55680400-55685000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr14:55680400-55685000	Weak transcription	HMEC	breast

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