Variant report
Variant | rs7153958 |
---|---|
Chromosome Location | chr14:55688743-55688744 |
allele | A/C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10130894 | 0.87[EUR][1000 genomes] |
rs10134937 | 0.87[EUR][1000 genomes] |
rs10135891 | 0.87[EUR][1000 genomes] |
rs10139912 | 0.94[ASN][1000 genomes] |
rs10144869 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10146943 | 0.85[AMR][1000 genomes] |
rs10149926 | 0.87[EUR][1000 genomes] |
rs10162552 | 0.87[EUR][1000 genomes] |
rs10483640 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs10498474 | 0.85[ASN][1000 genomes] |
rs11844441 | 0.87[EUR][1000 genomes] |
rs11850516 | 0.85[ASN][1000 genomes] |
rs11851023 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11851945 | 0.88[ASN][1000 genomes] |
rs12323804 | 0.97[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13379398 | 0.87[EUR][1000 genomes] |
rs13379420 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs17128230 | 0.85[ASN][1000 genomes] |
rs17128262 | 0.85[ASN][1000 genomes] |
rs17128275 | 0.88[ASN][1000 genomes] |
rs17128277 | 0.88[ASN][1000 genomes] |
rs17128292 | 0.88[ASN][1000 genomes] |
rs17128303 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs17128323 | 1.00[ASN][1000 genomes] |
rs17128434 | 0.87[EUR][1000 genomes] |
rs1886784 | 0.85[ASN][1000 genomes] |
rs1887494 | 0.85[ASN][1000 genomes] |
rs1952086 | 0.94[ASN][1000 genomes] |
rs2050669 | 0.87[EUR][1000 genomes] |
rs2065998 | 0.87[EUR][1000 genomes] |
rs2075598 | 0.85[ASN][1000 genomes] |
rs2274272 | 0.85[ASN][1000 genomes] |
rs2341536 | 0.87[EUR][1000 genomes] |
rs28379450 | 0.87[EUR][1000 genomes] |
rs28408795 | 0.88[ASN][1000 genomes] |
rs28436894 | 0.82[ASN][1000 genomes] |
rs28661252 | 0.87[EUR][1000 genomes] |
rs28681113 | 0.82[ASN][1000 genomes] |
rs28883964 | 0.89[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2985914 | 0.97[ASN][1000 genomes] |
rs3759666 | 0.85[ASN][1000 genomes] |
rs4334208 | 0.97[ASN][1000 genomes] |
rs55772085 | 0.85[ASN][1000 genomes] |
rs55848305 | 0.85[ASN][1000 genomes] |
rs55912862 | 0.94[ASN][1000 genomes] |
rs56192604 | 0.88[ASN][1000 genomes] |
rs56358335 | 0.85[ASN][1000 genomes] |
rs57064758 | 0.85[ASN][1000 genomes] |
rs57196783 | 0.85[ASN][1000 genomes] |
rs57612384 | 0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs57750925 | 0.85[ASN][1000 genomes] |
rs58737648 | 0.82[ASN][1000 genomes] |
rs59155162 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs59700273 | 0.82[ASN][1000 genomes] |
rs60023093 | 0.80[AMR][1000 genomes];0.97[ASN][1000 genomes] |
rs60204830 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs60549793 | 0.82[ASN][1000 genomes] |
rs60715972 | 1.00[ASN][1000 genomes] |
rs61662514 | 0.87[EUR][1000 genomes] |
rs6573004 | 0.85[ASN][1000 genomes] |
rs7141563 | 0.88[ASN][1000 genomes] |
rs7141706 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[ASN][1000 genomes] |
rs7142831 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs7145502 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs7147172 | 0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7147666 | 0.88[ASN][1000 genomes] |
rs7148663 | 0.85[AMR][1000 genomes] |
rs7148957 | 0.85[ASN][1000 genomes] |
rs7149385 | 0.82[ASN][1000 genomes] |
rs7150083 | 0.82[ASN][1000 genomes] |
rs7152543 | 0.82[ASN][1000 genomes] |
rs7153322 | 0.82[ASN][1000 genomes] |
rs7153418 | 1.00[ASN][1000 genomes] |
rs7153651 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs7154368 | 0.88[ASN][1000 genomes] |
rs7155704 | 1.00[ASN][1000 genomes] |
rs7155729 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs7155936 | 0.88[ASN][1000 genomes] |
rs7156997 | 0.82[ASN][1000 genomes] |
rs7157000 | 0.82[ASN][1000 genomes] |
rs7157585 | 0.88[ASN][1000 genomes] |
rs7159530 | 0.85[ASN][1000 genomes] |
rs7160411 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.94[ASN][1000 genomes] |
rs7160575 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs7160642 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs7160753 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs7161564 | 0.82[ASN][1000 genomes] |
rs72716670 | 0.82[ASN][1000 genomes] |
rs74050921 | 0.85[ASN][1000 genomes] |
rs74050928 | 0.85[ASN][1000 genomes] |
rs74050932 | 0.88[ASN][1000 genomes] |
rs74050937 | 0.85[ASN][1000 genomes] |
rs74050939 | 1.00[ASN][1000 genomes] |
rs74050958 | 1.00[ASN][1000 genomes] |
rs74050963 | 0.87[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs74050975 | 0.87[EUR][1000 genomes] |
rs74053904 | 0.87[EUR][1000 genomes] |
rs8004899 | 0.82[ASN][1000 genomes] |
rs8005218 | 0.82[ASN][1000 genomes] |
rs8007038 | 0.87[EUR][1000 genomes] |
rs8009060 | 0.88[ASN][1000 genomes] |
rs8009181 | 0.82[ASN][1000 genomes] |
rs8010751 | 0.88[ASN][1000 genomes] |
rs8010791 | 0.88[ASN][1000 genomes] |
rs8010993 | 0.82[ASN][1000 genomes] |
rs8011980 | 0.85[ASN][1000 genomes] |
rs8016444 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
rs8016716 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs8017821 | 1.00[ASN][1000 genomes] |
rs8021377 | 0.87[EUR][1000 genomes] |
rs946058 | 0.87[EUR][1000 genomes] |
rs9652341 | 0.87[EUR][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:55685200-55689000 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
2 | chr14:55686800-55690200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
3 | chr14:55687400-55689600 | Enhancers | HMEC | breast |
4 | chr14:55687800-55688800 | Enhancers | HUVEC | blood vessel |
5 | chr14:55687800-55689600 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
6 | chr14:55687800-55689600 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
7 | chr14:55688000-55689200 | Enhancers | NHEK | skin |
8 | chr14:55688200-55689200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
9 | chr14:55688200-55689400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
10 | chr14:55688400-55688800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
11 | chr14:55688400-55689000 | Enhancers | Duodenum Mucosa | Duodenum |
12 | chr14:55688600-55690600 | Weak transcription | NHDF-Ad | bronchial |