Variant report

Variant	rs4334208
Chromosome Location	chr14:55713197-55713198
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:55706022..55708410-chr14:55710949..55713300,2	K562	blood:
2	chr14:55712418..55714236-chr14:55736769..55739672,2	MCF-7	breast:
3	chr14:55712626..55715318-chr14:55876588..55879514,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000178974	Chromatin interaction
ENSG00000258413	Chromatin interaction
ENSG00000271180	Chromatin interaction
ENSG00000126775	Chromatin interaction

Extended variants
information (count: 91 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:91)

rs_ID	r²[population]
rs10130894	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs10138838	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs10139912	0.91[ASN][1000 genomes]
rs10144869	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs10146943	0.93[AMR][1000 genomes]
rs10149926	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10162552	0.81[AFR][1000 genomes]
rs10220441	0.81[AMR][1000 genomes]
rs10483640	0.80[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs10498474	0.82[ASN][1000 genomes]
rs11844441	0.85[AMR][1000 genomes]
rs11850516	0.82[ASN][1000 genomes]
rs11851023	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs11851945	0.85[ASN][1000 genomes]
rs12323804	0.97[ASN][1000 genomes]
rs13379398	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13379420	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17128230	0.82[ASN][1000 genomes]
rs17128262	0.82[ASN][1000 genomes]
rs17128275	0.85[ASN][1000 genomes]
rs17128277	0.85[ASN][1000 genomes]
rs17128292	0.85[ASN][1000 genomes]
rs17128303	0.97[ASN][1000 genomes]
rs17128323	0.92[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs17128370	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs1886784	0.82[ASN][1000 genomes]
rs1887494	0.82[ASN][1000 genomes]
rs1952086	0.91[ASN][1000 genomes]
rs2075598	0.82[ASN][1000 genomes]
rs2274272	0.82[ASN][1000 genomes]
rs28379450	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs28408795	0.85[ASN][1000 genomes]
rs28661252	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28883964	0.89[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2985914	0.94[ASN][1000 genomes]
rs3759666	0.82[ASN][1000 genomes]
rs55772085	0.82[ASN][1000 genomes]
rs55848305	0.82[ASN][1000 genomes]
rs55912862	0.91[ASN][1000 genomes]
rs56102648	0.84[AMR][1000 genomes]
rs56192604	0.85[ASN][1000 genomes]
rs56358335	0.82[ASN][1000 genomes]
rs57064758	0.82[ASN][1000 genomes]
rs57196783	0.82[ASN][1000 genomes]
rs57612384	0.86[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs57750925	0.82[ASN][1000 genomes]
rs59155162	0.97[ASN][1000 genomes]
rs60023093	0.80[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs60204830	0.80[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs60715972	0.97[ASN][1000 genomes]
rs61662514	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6573004	0.82[ASN][1000 genomes]
rs7141563	0.85[ASN][1000 genomes]
rs7141706	0.91[ASN][1000 genomes]
rs7142831	0.80[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7145502	0.80[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7147172	0.89[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7147666	0.85[ASN][1000 genomes]
rs7148663	0.93[AMR][1000 genomes]
rs7148957	0.82[ASN][1000 genomes]
rs7148959	0.84[AMR][1000 genomes]
rs7153418	0.97[ASN][1000 genomes]
rs7153958	0.97[ASN][1000 genomes]
rs7154368	0.85[ASN][1000 genomes]
rs7155704	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7155729	0.80[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7155936	0.85[ASN][1000 genomes]
rs7157585	0.85[ASN][1000 genomes]
rs7159530	0.82[ASN][1000 genomes]
rs7160411	0.91[ASN][1000 genomes]
rs7160575	0.97[ASN][1000 genomes]
rs7160642	0.80[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7160753	0.80[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs74050921	0.82[ASN][1000 genomes]
rs74050928	0.82[ASN][1000 genomes]
rs74050932	0.85[ASN][1000 genomes]
rs74050937	0.82[ASN][1000 genomes]
rs74050939	0.97[ASN][1000 genomes]
rs74050958	0.92[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs74050963	0.93[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs74050975	0.85[AMR][1000 genomes]
rs8007038	0.85[AMR][1000 genomes]
rs8009060	0.85[ASN][1000 genomes]
rs8010751	0.85[ASN][1000 genomes]
rs8010791	0.85[ASN][1000 genomes]
rs8011980	0.82[ASN][1000 genomes]
rs8016444	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs8016716	0.92[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs8017821	0.97[ASN][1000 genomes]
rs9323282	0.84[AMR][1000 genomes]
rs9652341	0.85[AMR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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