Variant report

Variant	rs72756408
Chromosome Location	chr9:95398033-95398034
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:95397145..95399782-chr9:95400372..95404536,5	K562	blood:
2	chr9:95268173..95269920-chr9:95396412..95398691,2	K562	blood:
3	chr9:95396936..95399818-chr9:95416936..95418922,2	MCF-7	breast:
4	chr9:95377379..95380656-chr9:95396900..95399025,3	MCF-7	breast:
5	chr9:95396399..95398698-chr9:95432451..95434302,2	MCF-7	breast:
6	chr9:95396120..95399108-chr9:95405492..95407819,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000127080	Chromatin interaction

Extended variants
information (count: 101 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:101)

rs_ID	r²[population]
rs17365144	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17366134	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17462606	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2277165	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2277167	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2277170	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34758505	0.84[ASN][1000 genomes]
rs3802383	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs41266685	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41273374	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs41305495	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs41312236	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754429	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72754430	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72754433	0.92[AMR][1000 genomes]
rs72754434	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754435	0.92[AMR][1000 genomes]
rs72754436	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72754437	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754440	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754442	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754443	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754444	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754445	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754446	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754447	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72754450	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754452	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754457	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754461	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754463	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754464	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs72754465	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754470	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754477	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754480	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72754482	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754483	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754485	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72754487	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72754489	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754491	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754493	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754496	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754499	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754501	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72756403	1.00[AMR][1000 genomes]
rs72756404	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756405	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756406	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756410	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756414	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756415	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756416	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756418	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756423	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756424	1.00[AMR][1000 genomes]
rs72756425	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756426	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756427	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756431	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756433	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756437	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756438	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756440	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756441	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756442	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756443	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756444	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756446	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756447	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756448	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756452	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756455	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756457	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756458	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756459	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756460	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756462	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756464	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756465	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756467	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756468	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756469	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756471	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756472	0.89[ASN][1000 genomes]
rs72756478	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72756483	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72756486	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72756489	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72756497	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72756498	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72756500	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72758504	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72758505	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72758508	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72758510	0.83[AMR][1000 genomes]
rs72758519	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72758524	0.84[EUR][1000 genomes]
rs72758525	0.84[EUR][1000 genomes]
rs72758536	0.81[EUR][1000 genomes]

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:95371400-95398200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr9:95371800-95399000	Weak transcription	Aorta	Aorta
3	chr9:95371800-95407400	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr9:95373000-95421200	Strong transcription	Monocytes-CD14+_RO01746	blood
5	chr9:95373200-95399200	Weak transcription	Small Intestine	intestine
6	chr9:95375200-95405000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr9:95375400-95403000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr9:95378200-95403600	Weak transcription	Fetal Brain Male	brain
9	chr9:95380800-95400600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr9:95380800-95429000	Weak transcription	Stomach Mucosa	stomach
11	chr9:95381400-95402800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
12	chr9:95384800-95421600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr9:95385800-95401800	Strong transcription	Osteobl	bone
14	chr9:95389000-95398600	Strong transcription	A549	lung
15	chr9:95390200-95411200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr9:95391800-95410600	Strong transcription	Left Ventricle	heart
17	chr9:95391800-95421000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
18	chr9:95392000-95407200	Strong transcription	NHLF	lung
19	chr9:95392000-95414600	Strong transcription	Duodenum Mucosa	Duodenum
20	chr9:95392000-95419600	Strong transcription	Primary T cells from cord blood	blood
21	chr9:95392200-95407600	Strong transcription	Primary B cells from peripheral blood	blood
22	chr9:95392200-95410800	Strong transcription	Brain Anterior Caudate	brain
23	chr9:95392400-95420800	Strong transcription	Primary neutrophils fromperipheralblood	blood
24	chr9:95392600-95403200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr9:95392600-95407800	Strong transcription	Brain Germinal Matrix	brain
26	chr9:95393200-95403400	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr9:95393200-95405600	Strong transcription	Fetal Intestine Small	intestine
28	chr9:95393200-95407600	Strong transcription	Lung	lung
29	chr9:95393200-95408400	Strong transcription	Fetal Intestine Large	intestine
30	chr9:95393200-95412000	Strong transcription	Right Ventricle	heart
31	chr9:95393200-95421200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
32	chr9:95393200-95421600	Strong transcription	Primary T helper cells fromperipheralblood	blood
33	chr9:95393600-95399600	Strong transcription	HUVEC	blood vessel
34	chr9:95393600-95405400	Strong transcription	Esophagus	oesophagus
35	chr9:95393600-95407200	Strong transcription	Cortex derived primary cultured neurospheres	brain
36	chr9:95393600-95407600	Strong transcription	HUES6 Cell Line	embryonic stem cell
37	chr9:95393600-95407600	Strong transcription	Spleen	Spleen
38	chr9:95393600-95408400	Strong transcription	Primary B cells from cord blood	blood
39	chr9:95393600-95421000	Strong transcription	Primary monocytes fromperipheralblood	blood
40	chr9:95393800-95398400	Strong transcription	HMEC	breast
41	chr9:95393800-95398600	Strong transcription	HSMM	muscle
42	chr9:95393800-95400200	Strong transcription	Muscle Satellite Cultured Cells	--
43	chr9:95393800-95401200	Strong transcription	Pancreas	Pancrea
44	chr9:95393800-95401200	Strong transcription	Hela-S3	cervix
45	chr9:95393800-95405600	Strong transcription	Gastric	stomach
46	chr9:95393800-95407200	Strong transcription	Brain Cingulate Gyrus	brain
47	chr9:95393800-95407400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
48	chr9:95393800-95407600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr9:95393800-95408200	Strong transcription	Primary T helper cells PMA-I stimulated	--
50	chr9:95393800-95408400	Strong transcription	Thymus	Thymus

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