Variant report

Variant	rs72756418
Chromosome Location	chr9:95404367-95404368
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:95397800..95401189-chr9:95403078..95407047,3	MCF-7	breast:
2	chr9:95403595..95406379-chr9:95468606..95470855,2	MCF-7	breast:
3	chr9:95383486..95386342-chr9:95403181..95404918,2	K562	blood:
4	chr9:95397145..95399782-chr9:95400372..95404536,5	K562	blood:
5	chr9:95402777..95405673-chr9:95412190..95414969,2	K562	blood:

Variant related genes	Relation type
ENSG00000127080	Chromatin interaction

Extended variants
information (count: 107 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:107)

rs_ID	r²[population]
rs17365144	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17366134	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17462606	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2277165	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2277167	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2277170	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34758505	0.84[ASN][1000 genomes]
rs3802383	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs41266685	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41273374	0.92[EUR][1000 genomes]
rs41305495	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs41312236	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754429	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72754430	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72754433	0.85[AMR][1000 genomes]
rs72754434	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754435	0.85[AMR][1000 genomes]
rs72754436	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72754437	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754440	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754442	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754443	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754444	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754445	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754446	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754447	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72754450	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754452	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754457	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754461	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754463	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754464	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72754465	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754470	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754477	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754480	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72754482	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754483	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754485	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72754487	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72754489	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754491	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754493	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754496	0.92[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs72754499	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754501	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72756403	0.92[AMR][1000 genomes]
rs72756404	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756405	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756406	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756408	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756410	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756414	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756415	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756416	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756423	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756424	0.92[AMR][1000 genomes]
rs72756425	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756426	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756427	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756431	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756433	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756437	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756438	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756440	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756441	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756442	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756443	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756444	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756446	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756447	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756448	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756452	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756455	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756457	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756458	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756459	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756460	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756462	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756464	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756465	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756467	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756468	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756469	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756471	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756472	0.89[ASN][1000 genomes]
rs72756478	0.92[EUR][1000 genomes]
rs72756483	0.92[EUR][1000 genomes]
rs72756486	0.92[EUR][1000 genomes]
rs72756489	0.92[EUR][1000 genomes]
rs72756497	0.92[EUR][1000 genomes]
rs72756498	0.92[EUR][1000 genomes]
rs72756500	0.92[EUR][1000 genomes]
rs72758504	0.92[EUR][1000 genomes]
rs72758505	0.92[EUR][1000 genomes]
rs72758508	0.92[EUR][1000 genomes]
rs72758519	0.92[EUR][1000 genomes]
rs72758524	0.92[EUR][1000 genomes]
rs72758525	0.92[EUR][1000 genomes]
rs72758536	0.88[EUR][1000 genomes]
rs72758539	0.84[EUR][1000 genomes]
rs72758540	0.84[EUR][1000 genomes]
rs72758542	0.84[EUR][1000 genomes]
rs72758543	0.84[EUR][1000 genomes]
rs72758545	0.84[EUR][1000 genomes]
rs72758547	0.84[EUR][1000 genomes]
rs72758554	0.84[EUR][1000 genomes]

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:95371800-95407400	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr9:95373000-95421200	Strong transcription	Monocytes-CD14+_RO01746	blood
3	chr9:95375200-95405000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
4	chr9:95380800-95429000	Weak transcription	Stomach Mucosa	stomach
5	chr9:95384800-95421600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr9:95390200-95411200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr9:95391800-95410600	Strong transcription	Left Ventricle	heart
8	chr9:95391800-95421000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
9	chr9:95392000-95407200	Strong transcription	NHLF	lung
10	chr9:95392000-95414600	Strong transcription	Duodenum Mucosa	Duodenum
11	chr9:95392000-95419600	Strong transcription	Primary T cells from cord blood	blood
12	chr9:95392200-95407600	Strong transcription	Primary B cells from peripheral blood	blood
13	chr9:95392200-95410800	Strong transcription	Brain Anterior Caudate	brain
14	chr9:95392400-95420800	Strong transcription	Primary neutrophils fromperipheralblood	blood
15	chr9:95392600-95407800	Strong transcription	Brain Germinal Matrix	brain
16	chr9:95393200-95405600	Strong transcription	Fetal Intestine Small	intestine
17	chr9:95393200-95407600	Strong transcription	Lung	lung
18	chr9:95393200-95408400	Strong transcription	Fetal Intestine Large	intestine
19	chr9:95393200-95412000	Strong transcription	Right Ventricle	heart
20	chr9:95393200-95421200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
21	chr9:95393200-95421600	Strong transcription	Primary T helper cells fromperipheralblood	blood
22	chr9:95393600-95405400	Strong transcription	Esophagus	oesophagus
23	chr9:95393600-95407200	Strong transcription	Cortex derived primary cultured neurospheres	brain
24	chr9:95393600-95407600	Strong transcription	HUES6 Cell Line	embryonic stem cell
25	chr9:95393600-95407600	Strong transcription	Spleen	Spleen
26	chr9:95393600-95408400	Strong transcription	Primary B cells from cord blood	blood
27	chr9:95393600-95421000	Strong transcription	Primary monocytes fromperipheralblood	blood
28	chr9:95393800-95405600	Strong transcription	Gastric	stomach
29	chr9:95393800-95407200	Strong transcription	Brain Cingulate Gyrus	brain
30	chr9:95393800-95407400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr9:95393800-95407600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr9:95393800-95408200	Strong transcription	Primary T helper cells PMA-I stimulated	--
33	chr9:95393800-95408400	Strong transcription	Thymus	Thymus
34	chr9:95393800-95412800	Strong transcription	Placenta	Placenta
35	chr9:95393800-95413400	Strong transcription	Dnd41	blood
36	chr9:95393800-95414000	Strong transcription	Fetal Thymus	thymus
37	chr9:95393800-95414000	Strong transcription	Rectal Mucosa Donor 29	rectum
38	chr9:95393800-95414400	Strong transcription	Primary T cells fromperipheralblood	blood
39	chr9:95393800-95419200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr9:95393800-95421000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
41	chr9:95394000-95407600	Strong transcription	Fetal Brain Female	brain
42	chr9:95394000-95408000	Strong transcription	Sigmoid Colon	Sigmoid Colon
43	chr9:95394000-95420800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
44	chr9:95394200-95418800	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
45	chr9:95394200-95419200	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
46	chr9:95395000-95416600	Strong transcription	GM12878-XiMat	blood
47	chr9:95395600-95405600	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr9:95396000-95420000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
49	chr9:95396800-95409200	Weak transcription	NHDF-Ad	bronchial
50	chr9:95396800-95422400	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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