Variant report

Variant	rs72756448
Chromosome Location	chr9:95431612-95431613
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:17)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:95430814..95434525-chr9:95525652..95528883,5	K562	blood:
2	chr9:95086363..95089965-chr9:95430183..95433166,4	MCF-7	breast:
3	chr9:95379288..95383213-chr9:95431051..95434876,7	MCF-7	breast:
4	chr2:32581210..32582813-chr9:95430213..95432682,2	MCF-7	breast:
5	chr9:95055398..95057147-chr9:95429877..95432258,2	K562	blood:
6	chr9:95086180..95088905-chr9:95429811..95432518,3	K562	blood:
7	chr9:94909200..94911052-chr9:95430848..95432803,2	K562	blood:
8	chr9:95431480..95432991-chr9:96212383..96214894,2	MCF-7	breast:
9	chr9:95431397..95433567-chr9:102582521..102584580,2	MCF-7	breast:
10	chr9:95267629..95269847-chr9:95430934..95432536,2	MCF-7	breast:
11	chr9:95429167..95431918-chr9:95447874..95449583,2	MCF-7	breast:
12	chr9:95428069..95433526-chr9:95524054..95531235,7	MCF-7	breast:
13	chr9:95386831..95389535-chr9:95429656..95431675,4	MCF-7	breast:
14	chr9:95431331..95434473-chr9:95569877..95572688,3	MCF-7	breast:
15	chr17:57913384..57915166-chr9:95431056..95433761,2	MCF-7	breast:
16	chr9:95402126..95404121-chr9:95429330..95432541,3	MCF-7	breast:
17	chr9:95396017..95401096-chr9:95429349..95431956,4	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000185963	Chromatin interaction
ENSG00000225511	Chromatin interaction
ENSG00000187984	Chromatin interaction
ENSG00000188312	Chromatin interaction
ENSG00000115760	Chromatin interaction
ENSG00000198000	Chromatin interaction
ENSG00000048828	Chromatin interaction
ENSG00000062716	Chromatin interaction
ENSG00000119508	Chromatin interaction
ENSG00000127080	Chromatin interaction
ENSG00000196305	Chromatin interaction
ENSG00000188938	Chromatin interaction

Extended variants
information (count: 138 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:138)

rs_ID	r²[population]
rs17365144	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17366134	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17462606	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17519320	0.84[ASN][1000 genomes]
rs17519397	0.84[ASN][1000 genomes]
rs17519719	0.84[ASN][1000 genomes]
rs17519922	0.84[ASN][1000 genomes]
rs17591372	0.84[ASN][1000 genomes]
rs17591776	0.84[ASN][1000 genomes]
rs17591958	0.84[ASN][1000 genomes]
rs17592026	0.84[ASN][1000 genomes]
rs2277165	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2277167	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2277170	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34758505	0.89[ASN][1000 genomes]
rs3780348	0.84[ASN][1000 genomes]
rs3802383	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs41266685	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs41273374	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs41278699	0.84[ASN][1000 genomes]
rs41305495	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs41312236	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72752471	0.84[ASN][1000 genomes]
rs72752472	0.84[ASN][1000 genomes]
rs72752484	0.84[ASN][1000 genomes]
rs72752485	0.84[ASN][1000 genomes]
rs72752486	0.84[ASN][1000 genomes]
rs72752492	0.84[ASN][1000 genomes]
rs72752493	0.84[ASN][1000 genomes]
rs72752497	0.84[ASN][1000 genomes]
rs72752502	0.84[ASN][1000 genomes]
rs72754403	0.84[ASN][1000 genomes]
rs72754404	0.84[ASN][1000 genomes]
rs72754408	0.84[ASN][1000 genomes]
rs72754410	0.84[ASN][1000 genomes]
rs72754411	0.84[ASN][1000 genomes]
rs72754415	0.84[ASN][1000 genomes]
rs72754418	0.84[ASN][1000 genomes]
rs72754420	0.84[ASN][1000 genomes]
rs72754421	0.84[ASN][1000 genomes]
rs72754423	0.84[ASN][1000 genomes]
rs72754425	0.84[ASN][1000 genomes]
rs72754429	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72754430	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72754433	0.92[AMR][1000 genomes]
rs72754434	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754435	0.92[AMR][1000 genomes]
rs72754436	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72754437	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754440	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754442	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754443	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754444	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754445	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754446	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754447	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72754450	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754452	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754457	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754461	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754463	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754464	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs72754465	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754470	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754477	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754480	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72754482	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754483	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754485	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72754487	0.92[AMR][1000 genomes]
rs72754489	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754491	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754493	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754496	1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs72754499	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72754501	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756403	1.00[AMR][1000 genomes]
rs72756404	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756405	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756406	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756408	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756410	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756414	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756415	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756416	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756418	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756423	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72756424	1.00[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs72756425	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72756426	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756427	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756431	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72756433	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756437	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72756438	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756440	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756441	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756442	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756443	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756444	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72756446	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756447	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756452	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756455	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756457	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756458	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756459	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756460	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756462	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756464	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756465	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756467	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756468	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756469	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756471	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72756472	0.94[ASN][1000 genomes]
rs72756478	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72756483	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72756486	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72756489	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72756497	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72756498	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72756500	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758504	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758505	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758508	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758510	0.83[AMR][1000 genomes]
rs72758519	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758524	1.00[EUR][1000 genomes]
rs72758525	1.00[EUR][1000 genomes]
rs72758536	0.96[EUR][1000 genomes]
rs72758539	0.92[EUR][1000 genomes]
rs72758540	0.92[EUR][1000 genomes]
rs72758542	0.92[EUR][1000 genomes]
rs72758543	0.92[EUR][1000 genomes]
rs72758545	0.92[EUR][1000 genomes]
rs72758547	0.92[EUR][1000 genomes]
rs72758554	0.92[EUR][1000 genomes]

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:95430600-95431800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
2	chr9:95430600-95431800	Enhancers	Spleen	Spleen
3	chr9:95430600-95431800	Flanking Active TSS	Dnd41	blood
4	chr9:95430600-95432000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr9:95430800-95431800	Flanking Active TSS	Primary T cells from cord blood	blood
6	chr9:95430800-95431800	Flanking Active TSS	Fetal Brain Female	brain
7	chr9:95430800-95431800	Flanking Active TSS	Fetal Lung	lung
8	chr9:95430800-95433600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr9:95430800-95433600	Active TSS	Right Atrium	heart
10	chr9:95430800-95433800	Active TSS	HUES64 Cell Line	embryonic stem cell
11	chr9:95431000-95431800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr9:95431000-95431800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
13	chr9:95431000-95431800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
14	chr9:95431000-95431800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
15	chr9:95431000-95431800	Flanking Active TSS	Liver	Liver
16	chr9:95431000-95431800	Flanking Active TSS	Brain Anterior Caudate	brain
17	chr9:95431000-95431800	Flanking Active TSS	Brain Germinal Matrix	brain
18	chr9:95431000-95431800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
19	chr9:95431000-95431800	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
20	chr9:95431000-95431800	Flanking Active TSS	Esophagus	oesophagus
21	chr9:95431000-95431800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
22	chr9:95431000-95431800	Flanking Active TSS	Rectal Smooth Muscle	rectum
23	chr9:95431000-95431800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
24	chr9:95431000-95432000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
25	chr9:95431000-95432000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr9:95431000-95432000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr9:95431000-95432000	Flanking Active TSS	Brain Hippocampus Middle	brain
28	chr9:95431000-95432000	Flanking Active TSS	Stomach Smooth Muscle	stomach
29	chr9:95431000-95433600	Active TSS	A549	lung
30	chr9:95431200-95431800	Flanking Active TSS	H1 Cell Line	embryonic stem cell
31	chr9:95431200-95431800	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
32	chr9:95431200-95431800	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr9:95431200-95431800	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
34	chr9:95431200-95431800	Flanking Active TSS	Brain Substantia Nigra	brain
35	chr9:95431200-95431800	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
36	chr9:95431200-95431800	Flanking Active TSS	Psoas Muscle	Psoas
37	chr9:95431200-95431800	Flanking Active TSS	Thymus	Thymus
38	chr9:95431200-95432000	Flanking Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr9:95431200-95432000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
40	chr9:95431200-95432000	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
41	chr9:95431200-95432000	Flanking Active TSS	Adipose Nuclei	Adipose
42	chr9:95431200-95432000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
43	chr9:95431200-95433600	Active TSS	Pancreatic Islets	Pancreatic Islet
44	chr9:95431200-95433800	Active TSS	NHLF	lung
45	chr9:95431400-95431800	Flanking Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
46	chr9:95431400-95431800	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
47	chr9:95431400-95431800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
48	chr9:95431400-95431800	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
49	chr9:95431400-95431800	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr9:95431400-95431800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin

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