Variant report

Variant	rs72756433
Chromosome Location	chr9:95417813-95417814
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:95401673..95403415-chr9:95415662..95417895,2	K562	blood:
2	chr9:94906968..94909844-chr9:95416661..95418482,2	K562	blood:
3	chr9:95415723..95417992-chr9:95421867..95424824,2	K562	blood:
4	chr9:95396936..95399818-chr9:95416936..95418922,2	MCF-7	breast:
5	chr9:95400830..95403415-chr9:95415662..95417895,3	K562	blood:
6	chr9:95415028..95419366-chr9:95430652..95433833,9	MCF-7	breast:
7	chr9:95411739..95414427-chr9:95417430..95420333,2	MCF-7	breast:
8	chr9:95416446..95420766-chr9:95422078..95429343,12	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000238996	Chromatin interaction
ENSG00000225511	Chromatin interaction
ENSG00000127080	Chromatin interaction

Extended variants
information (count: 108 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:108)

rs_ID	r²[population]
rs17365144	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17366134	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17462606	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2277165	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2277167	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2277170	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34758505	0.84[ASN][1000 genomes]
rs3802383	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs41266685	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41273374	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs41305495	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs41312236	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754429	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72754430	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72754433	0.92[AMR][1000 genomes]
rs72754434	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754435	0.92[AMR][1000 genomes]
rs72754436	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72754437	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754440	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754442	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754443	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754444	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754445	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754446	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754447	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72754450	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754452	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754457	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754461	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754463	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754464	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs72754465	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754470	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754477	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754480	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72754482	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754483	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754485	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72754487	0.92[AMR][1000 genomes]
rs72754489	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754491	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754493	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754496	1.00[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs72754499	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72754501	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72756403	1.00[AMR][1000 genomes]
rs72756404	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756405	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756406	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756408	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756410	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756414	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756415	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756416	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756418	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756423	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756424	1.00[AMR][1000 genomes]
rs72756425	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756426	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756427	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756431	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756437	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756438	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756440	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756441	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756442	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756443	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756444	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72756446	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756447	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72756448	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72756452	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756455	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756457	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756458	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756459	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756460	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756462	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756464	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756465	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756467	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756468	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756469	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756471	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72756472	0.89[ASN][1000 genomes]
rs72756478	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72756483	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72756486	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72756489	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72756497	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72756498	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72756500	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758504	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758505	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758508	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758510	0.83[AMR][1000 genomes]
rs72758519	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758524	1.00[EUR][1000 genomes]
rs72758525	1.00[EUR][1000 genomes]
rs72758536	0.96[EUR][1000 genomes]
rs72758539	0.92[EUR][1000 genomes]
rs72758540	0.92[EUR][1000 genomes]
rs72758542	0.92[EUR][1000 genomes]
rs72758543	0.92[EUR][1000 genomes]
rs72758545	0.92[EUR][1000 genomes]
rs72758547	0.92[EUR][1000 genomes]
rs72758554	0.92[EUR][1000 genomes]

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:95373000-95421200	Strong transcription	Monocytes-CD14+_RO01746	blood
2	chr9:95380800-95429000	Weak transcription	Stomach Mucosa	stomach
3	chr9:95384800-95421600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr9:95391800-95421000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
5	chr9:95392000-95419600	Strong transcription	Primary T cells from cord blood	blood
6	chr9:95392400-95420800	Strong transcription	Primary neutrophils fromperipheralblood	blood
7	chr9:95393200-95421200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
8	chr9:95393200-95421600	Strong transcription	Primary T helper cells fromperipheralblood	blood
9	chr9:95393600-95421000	Strong transcription	Primary monocytes fromperipheralblood	blood
10	chr9:95393800-95419200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr9:95393800-95421000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr9:95394000-95420800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
13	chr9:95394200-95418800	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
14	chr9:95394200-95419200	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
15	chr9:95396000-95420000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr9:95396800-95422400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr9:95398200-95420800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr9:95401200-95421800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr9:95401200-95422000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr9:95408000-95420800	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
21	chr9:95408400-95421200	Strong transcription	Brain Germinal Matrix	brain
22	chr9:95408600-95420800	Strong transcription	Fetal Brain Female	brain
23	chr9:95408800-95421000	Strong transcription	Thymus	Thymus
24	chr9:95408800-95426800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
25	chr9:95409600-95421200	Strong transcription	Cortex derived primary cultured neurospheres	brain
26	chr9:95409800-95420200	Strong transcription	Lung	lung
27	chr9:95409800-95431000	Weak transcription	Fetal Kidney	kidney
28	chr9:95410000-95418200	Strong transcription	Fetal Intestine Small	intestine
29	chr9:95410200-95420800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
30	chr9:95410400-95420800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr9:95410400-95420800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr9:95410800-95427000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
33	chr9:95411000-95431400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
34	chr9:95411400-95420200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr9:95411400-95421800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
36	chr9:95411600-95420800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr9:95411800-95419800	Weak transcription	H1 Cell Line	embryonic stem cell
38	chr9:95411800-95426600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
39	chr9:95411800-95427400	Weak transcription	Pancreatic Islets	Pancreatic Islet
40	chr9:95412000-95418400	Weak transcription	Aorta	Aorta
41	chr9:95412000-95419600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
42	chr9:95412000-95422000	Weak transcription	HUES48 Cell Line	embryonic stem cell
43	chr9:95412000-95422000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
44	chr9:95412000-95423800	Weak transcription	Muscle Satellite Cultured Cells	--
45	chr9:95412000-95426600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
46	chr9:95412000-95428400	Weak transcription	K562	blood
47	chr9:95412000-95431000	Weak transcription	Fetal Brain Male	brain
48	chr9:95412400-95431200	Weak transcription	Small Intestine	intestine
49	chr9:95412800-95418600	Genic enhancers	Placenta	Placenta
50	chr9:95413400-95427000	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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