The 2.0 version of rSNPBase

Variant report

Variant rs12757533
Chromosome Location chr1:92846826-92846827
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92765800-92850000 Weak transcription Small Intestine intestine
2 chr1:92792800-92850800 Weak transcription Fetal Heart heart
3 chr1:92795200-92850200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:92795200-92851400 Weak transcription Spleen Spleen
5 chr1:92804400-92853200 Weak transcription NHEK skin
6 chr1:92815000-92853200 Weak transcription Placenta Amnion Placenta Amnion
7 chr1:92816000-92851400 Weak transcription A549 lung
8 chr1:92817400-92851400 Weak transcription Rectal Smooth Muscle rectum
9 chr1:92818000-92851600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:92818000-92852600 Weak transcription Colon Smooth Muscle Colon
11 chr1:92818200-92851600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr1:92818800-92853000 Weak transcription Osteobl bone
13 chr1:92823600-92853200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:92824000-92851400 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr1:92824400-92850200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr1:92824400-92851400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:92824400-92852400 Weak transcription Colonic Mucosa Colon
18 chr1:92824600-92850200 Weak transcription Fetal Brain Female brain
19 chr1:92824600-92851400 Weak transcription Brain Substantia Nigra brain
20 chr1:92824600-92851400 Weak transcription Placenta Placenta
21 chr1:92824600-92851400 Weak transcription NHDF-Ad bronchial
22 chr1:92825400-92849800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:92825400-92851400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr1:92825600-92851400 Weak transcription Fetal Kidney kidney
25 chr1:92825600-92852400 Weak transcription HepG2 liver
26 chr1:92825600-92852800 Weak transcription HMEC breast
27 chr1:92825800-92850200 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr1:92826000-92850400 Weak transcription Lung lung
29 chr1:92826000-92851400 Weak transcription HSMMtube muscle
30 chr1:92826000-92852600 Weak transcription Brain Anterior Caudate brain
31 chr1:92826200-92849400 Weak transcription Fetal Stomach stomach
32 chr1:92826200-92853000 Weak transcription Fetal Brain Male brain
33 chr1:92826600-92850200 Weak transcription Fetal Muscle Leg muscle
34 chr1:92830400-92849800 Weak transcription Fetal Intestine Small intestine
35 chr1:92830600-92851400 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:92833400-92855000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr1:92833400-92856000 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr1:92833600-92852600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr1:92833600-92852800 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr1:92834000-92851400 Weak transcription Primary T cells fromperipheralblood blood
41 chr1:92834400-92855200 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr1:92835400-92855200 Weak transcription Hela-S3 cervix
43 chr1:92835600-92850800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr1:92835600-92851400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr1:92836200-92852400 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr1:92836400-92851400 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr1:92836600-92851400 Weak transcription Thymus Thymus
48 chr1:92838200-92851400 Weak transcription Esophagus oesophagus
49 chr1:92838600-92851400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:92840000-92851400 Weak transcription K562 blood

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Last update: Aug 31, 2015